Conserved Protein Domain Family
VPS11_C

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pfam12451: VPS11_C 
Vacuolar protein sorting protein 11 C terminal
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. Vps 11 is one of the evolutionarily conserved class C vacuolar protein sorting genes (c-vps: vps11, vps16, vps18, and vps33), whose products physically associate to form the c-vps protein complex required for vesicle docking and fusion.
Statistics
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PSSM-Id: 403597
View PSSM: pfam12451
Aligned: 90 rows
Threshold Bit Score: 42.7777
Threshold Setting Gi: 74607249
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGF84319      979 HRMVQELVRAQRLN--SKRHEHFVQKLGEgsEyEDKFSLIAEYFSKNIF 1025 Batrachochytrium dendrobatidis JAM81
XP_001487453  917 FDQVSALREEQLQA--KDQEQEFQQLLEE--T-TDRFRLITDYLGRGVM 960  Meyerozyma guilliermondii ATCC 6260
CCE73293      967 HAQVHSIRADQTKM--KDDLELLEQTLDE--S-PDRMKVLIDYLGKGVM 1010 Millerozyma farinosa CBS 7064
Q6BX81        966 LELAHSARADQLRT--KDDIELFEQSLNE--A-PDRFKVITNYLGKGVM 1009 Debaryomyces hansenii
XP_006687156  965 IDSIQTLRDEQFRA--KDEVELFESTLKE--S-SDKFKVISNYLGKGVM 1008 Yamadazyma tenuis ATCC 10573
XP_001383548  959 IEEIKAIRAGQFKS--KENLELFEGTLNE--T-QDKFRYISEYLGKGVM 1002 Scheffersomyces stipitis CBS 6054
EDK47489     1059 LDEMKYVKGSQYKL--KEQYEPFINSLHE--S-TDKFRYIADSIGKGVM 1102 Lodderomyces elongisporus NRRL YB-4239
XP_002549756  946 FNDIKEQKDMQNMIgkKENYEIFTNALHD--S-KDKFKFVSDYIGKGVM 991  Candida tropicalis MYA-3404
CCE43929      967 INDVNEMKQSQYKL--KENVDFFVQSLHE--S-SDTFKFISDYIGKGVM 1010 Candida parapsilosis
EEQ39927      955 LQSSRALRETQFKS--KDNYDVFDMDLND--A-TDRFKVITEYLGKGVM 998  Clavispora lusitaniae ATCC 42720
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