Conserved Protein Domain Family
FliC

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pfam12445: FliC 
Flagellin protein
This domain family is found in bacteria, and is typically between 125 and 147 amino acids in length. The family is found in association with pfam00669, pfam00700. There are two completely conserved G residues that may be functionally important. This family is the flagellin motor protein which confers motility to bacterial cells.
Statistics
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PSSM-Id: 372114
View PSSM: pfam12445
Aligned: 26 rows
Threshold Bit Score: 40.0822
Threshold Setting Gi: 75421322
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9S0T2       336 AGDGKSLG------NGGTATVTLD-----NTTYNFKAAan-vTDGagviaaaGVTYTATVSKDVILAQLQSASqaaaTAT 403 Escherichia coli
WP_001507509 346 IFNGANGH------DAVDAKITFGs----GMTVDFTQV----SNN-------VDIKGATVSAEDMNTALTGQA----YTV 400 Enterobacteriaceae
Q6VMU3       376 VLKDAAYN------AAYATSITTGtpgdaGAAATAGNAavgaLGAtavdnttADVADISISASQMASILQDKD----FTL 445 Escherichia coli
CAR13408     333 TDTQAKLSdlmannANAKTVITTDk----GTFTANTTK--------------FDGVDISVDASTFANAVKNET----YTA 390 Escherichia col...
Q9XCS4       313 GDTQATLAkvatatGAKAATIQTDk----GTFTSDGTA--------------FDGASMSIDANTFANAVKNDT----YTA 370 Escherichia coli
WP_000079698 322 DLFASGST------LATTGSIQLS-----GTTYNFGAAat-----------sGVTYTKTVSADTVLSTVQSAA----TAN 375 Escherichia coli
Q93ES1       322 LFKAADDK------DAAQSSIDFG-----GKKYEFAGGnst--------nggGVKFKDTVSSDALLAQVKAD-------- 374 Escherichia coli
Q6VMU7       331 AGDGQSIG------FKKTASVTMG-----GTTYNFKTG----ADAdaatanaGVSFTDTASKETVLNKVATAKqgkaAAA 395 Escherichia coli
WP_012701330 333 VGAGAAGT------DTSARSLTVG-----GVTYTGAGTt------------aGLSYTDTATSSDVLAASAS--------- 380 Azotobacter vin...
Q7AD06       335 ALLKAASE------GSDGASLTFN-----GTEYTIAKAtpatTTPvaplipgGITYQATVSKDVVLSETKAAA------- 396 Escherichia col...
Q9S0T2       404 dgdTVAT---INYKSGvmigSATFTNgkgtadgmtsgttpvvatgaKAVYVDGNNELTSTASydT--TYSVNADtGAVKV 478 Escherichia coli
WP_001507509 401 ---ANGA---QSYDVAad-gAVTATTg------------------gATVNIGAEGELTTAANktVteTYHEFAN-GNILD 454 Enterobacteriaceae
Q6VMU3       446 ---SDGS---DTYNVTs--nAVTING--------------------KAANIDDSGAITDQTSkvV--NYFAHTN-GSVTN 494 Escherichia coli
CAR13408     391 ---TVGVtlpATYTVNn--gTAA------------------------SAYL-VDGKVSKTPA-----EYFAQAD-GTITS 434 Escherichia col...
Q9XCS4       371 ---TVGA---KTYSVTt--gSAAA----------------------DTAYM-SNGVLSDTPP-----TYYAQAD-GSITT 413 Escherichia coli
WP_000079698 376 tavTGAT---IKYNTGiqsaTASFGGantng-----------agnsNDTYTDADKELTTTASytI--NYNVDKDtGTVTV 439 Escherichia coli
Q93ES1       375 ---STANnvkITFNNGplsfTASFQNgvsg------------saasNAAYIDSEGELTTTESynT--NYSVDKDtGAVSV 437 Escherichia coli
Q6VMU7       396 dgdTSAT---ITYKSGvqtyQAVFAAgdgtasaky--adkadvsnaTATYTDADGEMTTIGSytT--KYSIDANnGKVTV 468 Escherichia coli
WP_012701330 381 ---TVAS---IEMHNGitsaTIDFDNtgaq------------sstgTQVYVDEDGQLTTVGSytT--TFAVNADtGEVTV 440 Azotobacter vin...
Q7AD06       397 ---ATSS---ITFNSGvlskTIGFTAges--------------sdaAKSYVDDKGGITNVADytV--SYSVNKDnGSVTV 454 Escherichia col...
Q9S0T2       479 vsgtgt----gkfeaVAGADAYVSKDGKLTTETTS 509 Escherichia coli
WP_001507509 455 ---------------DDGAALYKAADGSLTTEATG 474 Enterobacteriaceae
Q6VMU3       495 ---------------DTGSTIYATEDGSLTTDAAT 514 Escherichia coli
CAR13408     435 ge-----------naATSKAIYVSANGNLTTNTTS 458 Escherichia coli UMN026
Q9XCS4       414 te-----------daAAGKLVYKGSDGKLTTDTTS 437 Escherichia coli
WP_000079698 440 asngaga--tgkfaaTVGAQAYVNSTGKLTTETTS 472 Escherichia coli
Q93ES1       438 tggsgt----gkyaaNVGAQAYVGADGKLTTNTTS 468 Escherichia coli
Q6VMU7       469 dsgtgt----gkyapKVGAEVYVSANGTLTTDATS 499 Escherichia coli
WP_012701330 441 vdnsdt---agdyalEEGATVYVGSNGRLTTSTTS 472 Azotobacter vinelandii
Q7AD06       455 agyasatdtnkdyapAIGTAVNVNSAGKITTETTS 489 Escherichia coli O157:H7
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