Conserved Protein Domain Family
Pax2_C

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pfam12403: Pax2_C 
Paired-box protein 2 C terminal
This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with pfam00292. This family is the C terminal of the paired-box protein 2 which is a transcription factor involved in embryonic development and organogenesis.
Statistics
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PSSM-Id: 403565
View PSSM: pfam12403
Aligned: 16 rows
Threshold Bit Score: 93.716
Threshold Setting Gi: 0
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A0JMA6       352 SAFSHPASVYGQFTSH-MASGRDVVGSTLPGYPPHIP-SGQGNYASSAIAGMVaAGGDYSGNAYSHGAYAAYGE-SWRFP 428 tropical clawed...
XP_007962049 286 STNPELGSNVSGTQTYpVVTGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQYTAYNE-AWRFS 363 green monkey
ACM91590     111 pTPADIGSSVPGPQSYpIVTGRDLASTTLPGYPPHVPpAGQGSYSAPTLTGMV-PGSEFSGSPYSHPQYSSYND-SWRFP 188 human
XP_018551314 287 GTGAELGASVSGPQSYsLVPGRDIASTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGGDFSGSPYSHPQYSTYNE-SWRFP 364 barramundi perch
1_pfamImport   7 GAGAELGGSVSGPQSYsLVPGRDLSSTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGRCYASSPAGTQSRAIYNT-PQRWA 84 
XP_015201452 258 pTPADLGTSVPGAQSYqLVAGRDLASTTLPGYPPHVPpAGQGSYSTPALTGMV-PGSDFSGSPYTHPQYSTYNE-SWRFP 335 spotted gar
XP_015201926 355 CAYAHRGSSYGQYASQpLIAGREMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYTHPQYTTYNE-AWRFS 432 spotted gar
6_pfamImport   7 NAFPHAASVYGQFPGQpLLPGREMVGPTLPGYPPHIPsSGQGSYASSAIAGMV-AGKE-NGDGWD--PSGGVGEgAWQLL 82 
XP_023812244 259 GTAGELGSSVSGPQSYsLVPGRDLASTTLPGYPPHVPpTGQGSYSTPSLPGMV-PGGDFSGSPYSHPQYSTYNE-SWRFP 336 Japanese medaka
PIO31986     151 SSFTHHGPPYGQFGSQpLIAGRDMTSTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQYTTYNE-AWRFS 228 American bullfrog
A0JMA6       429 SSS----LLGSPYYYSSATRTAPP------PTTAGAYD 456 tropical clawed frog
XP_007962049 364 NPA----LLSSPYYYSAAPRGSAP------AAAAAAYD 391 green monkey
ACM91590     189 NPG----LLGSPYYYSAAARGAAP------PAAATAYD 216 human
XP_018551314 365 NPS----LLGSPYYYSATSRGAGP------AATATAsa 392 barramundi perch
1_pfamImport  85 SPSgsadLFQQDY---GSLLGTEI------GCSSGLF- 112
XP_015201452 336 NPS----LLVFQQDYG-SRLGSEI------GCTSGffp 362 spotted gar
XP_015201926 433 NPA----LLMPH-------LEAPPlpllplPTTATSYh 459 spotted gar
6_pfamImport  83 PLS----WLSSPYYYSSTSRASGP------PAAAAAFD 110
XP_023812244 337 NPS----LLVFQQDYG-SLLGTEI------GCSSSLFt 363 Japanese medaka
PIO31986     229 NPA----LLSSPYYYSATSRGSAP------PTAATAYD 256 American bullfrog
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