Conserved Protein Domain Family
DEADboxA

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pfam12343: DEADboxA 
Cold shock protein DEAD box A
This domain family is found in bacteria, and is typically between 68 and 89 amino acids in length. The family is found in association with pfam00270, pfam00271, pfam03880. This family is the C terminal region of DEAD box A, a protein expressed under conditions of cold shock which is involved in various cellular processes such as transcription, translation and DA recombination.
Statistics
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PSSM-Id: 403528
View PSSM: pfam12343
Aligned: 4 rows
Threshold Bit Score: 77.7596
Threshold Setting Gi: 123520128
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0WBG1       591 GGERRG--G-GRP-FSGERREGAgappRRSFsGDRAPTGg-------GERRGNRDGQRsaAPRRDDAAAPAaaaaaPaRR 659 Yersinia pestis
Q2NW17       561 GGERRGglGtGRGnYSGERRDGG----RRSF-SDRREGAg------aGERRFSRDGQR--APRRDGDSAPA-----G-RR 621 Sodalis glossin...
WP_004150943 574 GGERRE--G-GRG-FGGERREG-----GRGFgGERREGGrgegrrfsGERR---EG-R--APRRDDASAPRrddsaG-RR 637 Enterobacteriaceae
WP_002441966 567 RG--------GRS-FGGERREGGrrdgGRGFgGERREGGrgdgrrfsGERR---DGNR--GPRRDD-SAPR-----P-AR 625 Shimwellia blattae
Q0WBG1       660 RF-GDA 664 Yersinia pestis
Q2NW17       622 RFgGDA 627 Sodalis glossinidius str. 'morsitans'
WP_004150943 638 RFgGDA 643 Enterobacteriaceae
WP_002441966 626 RFgGDA 631 Shimwellia blattae
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