5IU0


Conserved Protein Domain Family
RbcS

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pfam12338: RbcS 
Ribulose-1,5-bisphosphate carboxylase small subunit
This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam00101. There is a conserved APF sequence motif. There are two completely conserved residues (L and P) that may be functionally important. This family is the small subunit of ribulose-1,5-bisphosphate.
Statistics
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PSSM-Id: 403524
View PSSM: pfam12338
Aligned: 11 rows
Threshold Bit Score: 51.9082
Threshold Setting Gi: 548844343
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5IU0_I         2 ASS-MLSSAAVVT-------SpaqATMVAPFTGLKSSASFPvTRKANND 42 
KRG93869       2 ASS-MISSPAVTTvn---raG---AGMVAPFTGLKSMAGFP-TRKTNND 42  soybean
KRG93872       2 ASS-PISSPVVTIin---rvG---VSMVAPFTGLKSMAGIP-TRKTNSD 42  soybean
XP_002868775   2 ASS-MLSSAAVVT-------SpaqATMVAPFTGLKSSATFPvTRKANND 42  Arabidopsis lyrata subsp. lyrata
P05349         2 ASS-IVSSAAVATr-----gNgaqASMVAPFTGLKSTASFPvSRKQNLD 44  tomato
P07179         2 ASS-VISSAAVATr-----sNvtqASMVAPFTGLKSSATFPvTKKQNLD 44  tomato
ERN03952       2 ASTvMVSSAAVASsaaitrtAps--qYFAPFSGLKSTAAFPvTKKPTTD 48  Amborella trichopoda
XP_002531624   2 ASS-IVPS-TMASln---raAp-qASMVAPFTGLKSSSVFPvTRKQNND 44  castor bean
XP_002276967   2 ASS-MVSSATVATin---raTpaqANMVAPFTGLKSLSTFPgTRKANTD 46  wine grape
XP_006383456   2 ASS-VISSAAVATvn----rTpaqANMVAPFNGLKSTSAFPvTRKANND 45  black cottonwood
EEF30223       2 ASS-MLSTATVASln---raSpaqASMVAPFTGLKSTSAFPvTRKTNTD 46  castor bean
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