Conserved Protein Domain Family
Ipi1_N

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pfam12333: Ipi1_N 
Rix1 complex component involved in 60S ribosome maturation
This domain family is found in eukaryotes, and is typically between 91 and 105 amino acids in length. This family is the N terminal of Ipi1, a component of the Rix1 complex which works in conjunction with Rea1 to mature the 60S ribosome.
Statistics
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PSSM-Id: 403521
View PSSM: pfam12333
Aligned: 111 rows
Threshold Bit Score: 40.6858
Threshold Setting Gi: 145351596
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_014168853        142 DEVRPMAAKILLYVRAGITNLSSAVRDDALSTLEWLLEVAGEDLVSSPgGWLKTLNGFGAMMGWVAppppgsagaGGVGS 221 Grosmann...
XP_002055489        135 DAVAPFFHIIAPYLRCAMTHVQPAIQEDSLLLLDVLLQRVPSRLLAER-SASTIISNFIDMISRQRhd------tQHTNR 207 Drosophi...
XP_002011837        135 EAVVPFFHIIAAYLRCAMTHVQPSIQEDSLLLLDVLLQRVPSRllae-rsasTIISNFIDMISRTRh--------DTQHT 205 Drosophi...
XP_001963959        134 SAVAPFFHVIATYLRCAMTHVLPAIQEDSLLMLDVLLQRVPPAllae-rsasVIIGNFIDMISRSRh--------DNERA 204 Drosophi...
WGS:AAQB:GK14830-PA 134 EAVAPFFHILSSYLRCAMTHIQPAIQEDSLLMLDVLLERVPPKllae-kssyIIIGNFIDMISRSRh--------DQEKS 204 Drosophi...
OWR40820            141 EKIEPFFDIMSTYLRSAMTHIDSRIQEDSLFFLDILLLCTPSKvaq---dfhKIIPNFLDMISKLRv--------DSKPG 209 Danaus p...
XP_004932679        139 EKIDPFFDVMSTFLRSAMTHINSRIQEDSLLFLDILLLCAPMKmak---dfyRIIPNFLDMISKLHi--------DSKPG 207 domestic...
XP_008201753        141 DQLLPFCNILISYLTCAMTHIDHNIMEDSLLFLDILIQHCNSFlad---nsqKILLYFLDMISKLRs--------QAQPG 209 jewel wasp
EFN70805            141 EQITPYCNILISYLSCAMTHIDSRIKEDSLLFLDVLMENCGSVlak---dghKILPNFLGMICRLHs--------EIKPG 209 Florida ...
EFN78967            139 KDLLPYFDVLISYLNCAMTHINPYIKEDSLHFLDILLHNCGNMlvk---dshKILPNFVSMICTLHd--------NKYSG 207 Jerdon's...
XP_014168853        222 GWSSapkssfaaiatksgsSSGGRRLAtGGQAYARQIAALAK 263 Grosmannia clavigera kw1407
XP_002055489        208 LLTVri------------gQGQGQGQLtTIKWRTKVLLRLQQ 237 Drosophila virilis
XP_002011837        206 NRLLt--------------VRLGQGQLtTIKWRTKVLLRLQQ 233 Drosophila mojavensis
XP_001963959        205 NRTLt--------------LNLGQGKQtTVKWRTKVLIRLHQ 232 Drosophila ananassae
WGS:AAQB:GK14830-PA 205 NRLLt--------------LNLGQGKEsTIKWRTKVMLRLEQ 232 Drosophila willistoni
OWR40820            210 RTLT----------------VNLNSQItTVKWRVKVFQRLQE 235 Danaus plexippus plexippus
XP_004932679        208 RTLT----------------VNMESQItSVRWRSKVLHRLQD 233 domestic silkworm
XP_008201753        210 RQLT----------------TNLNSKStSMKWRIKVLNSLQQ 235 jewel wasp
EFN70805            210 RQLT----------------TTLNSKStNIKWTIKIMKRMAN 235 Florida carpenter ant
EFN78967            208 QLT-----------------TIPNFKNtNIKWRTKVLERLAN 232 Jerdon's jumping ant
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