Conserved Protein Domain Family
Baculo_F

?
pfam12259: Baculo_F 
Baculovirus F protein
This protein is found in a variety of baculoviruses. It is known as the F protein. Matches to this family are additionally found in some presumed transposons.
Statistics
?
PSSM-Id: 371998
View PSSM: pfam12259
Aligned: 31 rows
Threshold Bit Score: 435.926
Threshold Setting Gi: 81960704
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
YP_001651037  11 STLATMLLTLSTivvtttyagaerlMNADDIVNVQQLPHTSGFYYQPINKMH-FVESLWTFVIEMDHGAIFLELDTLYKE 89  Orgyia leucosti...
ABQ51967      15 TNKMFITLLIIFf-----------aLSRAEYVEVDTFVSPGGLHYEYNNKLI-YAVNTWNFVLNVNFTVLKERIDDMYLL 82  Spodoptera litu...
ABS17588       3 RLILCVIFIFSFveggg---dgivdDEINKYIKNQDF-NVSGFHYEFQNNLG-FVVNSWNFILNVNYNVLKDRLKQLEEL 77  Agrotis segetum...
Q7T9Z2         5 ILISIFVVLCTNg------------DKIDKYIKIIKV-NETGFHYEYVGKLG-FVVNSWHFIFKIDYTVLNVQLQKAKDI 70  Adoxophyes oran...
AKS25366       5 KVIVTIFALHTLlv---------ssNSIEESVRITPI-TTTGFYYEFYSNLG-FVVNTWSFILNIQYDLLLDRLIQLKSM 73  Clostera anasto...
Q1A4S3         6 CIIAWLVIKTSKsey--------geYGITPDYSIVPI-TKAGFHYEFQSTLG-FVVNTWSFILNIEYTLLKNRLFELKAL 75  Choristoneura o...
AEB00318       2 SLVLGLALLCTVyv----------sAFDDAPISITPI-NETGFHYEFYSRLG-FVVNSWSFVVNVDHTILLDRINELRNT 69  Clostera anacho...
Q7T5Q9         5 KLDYFYFEMIKIipiffy--vicgaQNIGDYVHIQPI-SDTGFHYEFQNQLG-FVVNTWSFILNIEYVKLKNRLADLQNI 80  Cryptophlebia l...
Q8JS32         6 KTLQQLLLLVALgl---------aaADIDSVIKIDPL-TDTGFHYEYQTNLG-FVVNTWSFILNIEYTILRDRLVELKNV 74  Phthorimaea ope...
YP_950744      5 KLIATYAIILSTts----------lVVGRDRITFTPLEDSSGLLFERMYGLRhYTNDRFVFVKKFDFYPVLQELNNIKSK 74  Maruca vitrata ...
YP_001651037  90 TQHFVEFL-NTQPVNNCSS----KRVIQAEVNTFIVKQILALVQKHNDLDSKIPKAGEyddHDNL--MLQDVqaQRAtrR 162 Orgyia leucosti...
ABQ51967      83 LNANLTID------DTCKE-----YGYDRRLNYYLTTKIPNLYQTHDSIGFLLIHK-----------RINSK----V--R 134 Spodoptera litu...
ABS17588      78 CSSLLQKMdSGKELHDCAFn--dAGGYERELKYIKERKILNLYEAHDSIKFLLVHK-----------KIGTK-------R 137 Agrotis segetum...
Q7T9Z2        71 LNT--------NNKLNCTS-----QATKKEISYLLNERIVTIEEIHRSIEYLLGKKN----------------------R 115 Adoxophyes oran...
AKS25366      74 SDKMHTLVlKNDSALHCLHn--eHNDTVRDIEYILNTKIPNLLDTHNSIEFLLAHK-----------RLTTNknVGR--R 138 Clostera anasto...
Q1A4S3        76 SNTLHNKT------EKCLNn---KDIYQREISYIINRKIANLLETHNSIEYLLVHK-----------KLPKK---SK--R 130 Choristoneura o...
AEB00318      70 SLMLLQAFnANGSLQHCEWtvddGNEYARELTYLVERRVVSLLDTHHSIEALLVHG-----------RAPPR-------R 131 Clostera anacho...
Q7T5Q9        81 TAEIHQAF--DNTLINCSA------NYQSEVDYILNEKIVTLFDTHNSIEFLLIHK-----------RLPKQ----T--R 135 Cryptophlebia l...
Q8JS32        75 SNTLMVSLdRGGVLANCSWn--dGGGYKRELDYVITRKLQNLFETHDSIEYLLIHK-----------RLPDH----K--R 135 Phthorimaea ope...
YP_950744     75 IELYASRF------LTCKI------AIKQNRSSIIKARIENRLQFLTQLNKDLVRYSVeesYNDVleNI----------N 132 Maruca vitrata ...
YP_001651037 163 QKRG--------ILNFVGSIDKF----LFGVMDQNDANLLHKLAKSDNALNNQVKQLTDELISLSSYMEHS-QCVEQHQN 229 Orgyia leucosti...
ABQ51967     135 VKRNlf----ngAFNFVGRFDKY----LFGVMDDYDAQVLYELVKSDNSTKIRVKSIATQTLKLAESMDSIrHKVSEMEP 206 Spodoptera litu...
ABS17588     138 KRRSlf----ggAFNFVGRFYKY----SIGLMDDNDAALLYEVAKHENSTDYRVKVLTNETLSITEYLNSVkHNIENV-- 207 Agrotis segetum...
Q7T9Z2       116 ITRDvdnymlggMLNFVGRTWKY----TIGVMDDRDADTLYELVDKMDNVEDHIKVLTNETLNLSKFMENNyYRIDIN-- 189 Adoxophyes oran...
AKS25366     139 VKRNlf----ggAFNFVGRIDKY----LFGVMDDNDATLLYELANHTNTSDYRIKTLTKETLRLADNMQGIeHNINTL-- 208 Clostera anasto...
Q1A4S3       131 TKRGff----ggAFNFVGRANKY----FFGVMDDNDAALLYELSNHTNNTDYRIKVLTNETLHIAENLKNIkHKIEDQ-- 200 Choristoneura o...
AEB00318     132 MKRNlf----ngAFNFVGRVDKY----LFGVMDDKDAAMLYDLTLRENSTEYRIKTLTNQTLCLAEVLQNMrHELEDK-- 201 Clostera anacho...
Q7T5Q9       136 RKRGlf----ggAFNFVGRFYKY----TLGVMDDRDAALLYEVAENANNTEFRVKTLTNETINLVKYVNSLrYALNIA-- 205 Cryptophlebia l...
Q8JS32       136 KKRGlf----ggAFNFMGRFYKY----TMGVMDDEDAALLYDLANHENTTEYRIKMLTNETLQIGKYLQSIrHDLENT-- 205 Phthorimaea ope...
YP_950744    133 LEYGd-------SAEF-EVYDDYehlsHWSNMTVSDAQAL--LQNPPKDRVMFLKTISAKNTNISEYINST--------- 193 Maruca vitrata ...
YP_001651037 230 DACIYIDSKMNLLKAQIDEIDLLYTNLDRAVDNAL-VNKV--NSLIMTPKRLLKELTSVTKYLPPKTA-WPV--SLELDN 303 Orgyia leucosti...
ABQ51967     207 VSCYHIQRRLDYIHDNLEEVEFNYNKIIEGIYMALnDKQA--SPFIVHPDLILLEMKGVSDNFDDGETeWVI--EPKSSN 282 Spodoptera litu...
ABS17588     208 VSCHFLERQLVYIKDNLEEIETTYSKILTAVQLSLySGRL--STFIISPQLVLDEMVQVDKQSLDRETeWIS--DPVIEK 283 Agrotis segetum...
Q7T9Z2       190 DKCDSLD--LTNIKNNINEIEMQYNKLITGIQTSIySRKL--SSLIYNPQNLLMEMKNVDSNVWDKETeWVV--EPQHSR 263 Adoxophyes oran...
AKS25366     209 AKCHQVDHLIVLLKDNLDEIESVYNKIITGIQTALySGKL--SSLIIQPHLILDEMDSVDSNAWDEETeWVV--KPTHDQ 284 Clostera anasto...
Q1A4S3       201 IDCK-LDSQLIYLKDNLEEIETTYNKIITGIQTALySNKL--SSLIINPNVLLDEMLKIDSKAYDKETeWVI--KPSFED 275 Choristoneura o...
AEB00318     202 LGCKYLDRQLVYLKQNMNEIEKLYDKIVAAIEMAMfANKI--HTSIIDPLLLMTEMESVDSNALDRETrWVV--NPA--S 275 Clostera anacho...
Q7T5Q9       206 ENCESLDRKLVHIKDNLDDIESTYNKIIAGIQMALySNRL--SSLIMNPRILLDEMKSVDSNLWDNESeWVV--KPSFEQ 281 Cryptophlebia l...
Q8JS32       206 LNCQYLERQLVYLKDNLEEIETTYNKIVTGIQMAMySTRL--SSLIMDPKTLLAELDEVDNKRWDSESvWAV--QPQIEN 281 Phthorimaea ope...
YP_950744    194 IECTDLANIMNVFNEKLNDASALAKMLKRIMKQTH-KNKLdiSNTVLDDGMLLTEMKKLVQTLHNHNRaWVVdfNKTMND 272 Maruca vitrata ...
YP_001651037 304 MHNLINndIIKSHVFLTKDRKLLFILEMPLIGQQ--LYNVYQVVPIPFCVN-SKCAVIVPDSKYLAVSSN--RQSYARLE 378 Orgyia leucosti...
ABQ51967     283 MHYIMS--LVQCHVFLVNENEIMFVVQSPRIYKT--KFELYKILSIPNCNKdHVCKFLTPRSEYVAFDDAt-NKTFVRLN 357 Spodoptera litu...
ABS17588     284 MHTIMH--VTHCSVFINPDDELMFVLQIPRMDKT--KFELYKVVPVPQCNGkRICKFLSAQSQYIGFEKK--QMYYTRLD 357 Agrotis segetum...
Q7T9Z2       264 MHAIMN--LIQCDVFKDAHNMLVFVINVPRMDKS--QFSLYKTVPVPKC-LnEICKFIAPDSKYIGFNED---NQYVRLD 335 Adoxophyes oran...
AKS25366     285 MHTVMR--LIQCSVFINPVNELMFVIQVPRMDKS--KFVLYKPVSIPSCEK-KMCKFLVPQSRYIGFESNndAKHYVRLD 359 Clostera anasto...
Q1A4S3       276 MHTVMH--IVQCNVFINPLDQLMFVIQVPRMDKS--KFDMYKPVSLPDCDKnKMCKFLIPQSQYIGFEVKgeSKHYVRLD 351 Choristoneura o...
AEB00318     276 IHDIVH--LTKCSVFLNPQGRLTFVVQVPRMDKS--VFTLYQTVPLPQCQFnRLCKFIAPQSKFIGFEEKsdGRHYVRLD 351 Clostera anacho...
Q7T5Q9       282 MHSIMR--MVQCNVFINPRDELMFVIQVPRIDKS--KYMLYKPVPLPECDSnKICKFIPSQSQYIGFEMHk-SKHYIRLD 356 Cryptophlebia l...
Q8JS32       282 MHSVMQ--VITCFVFINPRGQLMFVIQVPRIDKT--RYDLYKPVAIPECVDpPVCKFLAPQSAYIGFESRgeQKHFVRID 357 Phthorimaea ope...
YP_950744    273 SFDLSQ--AYKLHLYLDLNTVIMFITM-PLLKATsvSFNLYRVTTVPFC-RgRMCLLIVSDNEYFGISDS--KNYYVPVS 346 Maruca vitrata ...
YP_001651037 379 DdtTKVCKT--AIGALLCFKPKIVHDASQATLCDIKILLDNnaADADTVVKNCDVRVGHFDVQIFH--PISYYNNWLYVL 454 Orgyia leucosti...
ABQ51967     358 D--ISACKQ--IQEYTVCYGSFKIDLIKKTTDCDVKLFFNN-------TVSNCDVRAGKFYSEIFQ--NLNQYNRWLYMV 424 Spodoptera litu...
ABS17588     358 D--TSTCTV--LENLTLCFGSMTSKYISYTNDCDVKMFYNM------DVRSNCEVHASKFYSEIFY--SLNNVNKWLYMV 425 Agrotis segetum...
Q7T9Z2       336 D--INDCSQ--LNNLVLCYDSITSKKIDYTSSCDVRLFKNN------KDLHKCDVHATRFSKEIFY--NLNNNNKWFFIM 403 Adoxophyes oran...
AKS25366     360 D--TSACSQ--FDNFTLCYGSMTSKKSEYSPNCDVRLFKGL-------NSKNCAVHASLFQNEIFY--SLNNVNRWLYMI 426 Clostera anasto...
Q1A4S3       352 D--TSTCTK--LDNLTLCYGSMTSKKSDYSPNCDVRLFRG------LNHNNNCEVHATQFQNEIFY--SLNNANKWLFMV 419 Choristoneura o...
AEB00318     352 N--TNRCTF--VNDLTLCYDSMTVGKIDYSPSCDVRLFKNL-------THDSCLVHASKFSSEIFQ--PLNNVNRWLYVI 418 Clostera anacho...
Q7T5Q9       357 D--TSTCNA--IDNITLCYGSMTTKKIMYSPNCDVKLFKGL-------HHNNCEVHATRFHSEIFY--SLNNVNRWLYMV 423 Cryptophlebia l...
Q8JS32       358 D--TTTCTH--IENLTLCYGSVTSQKIEYSSDCDVRLFKGL-------SWEKCPVHATKFHTEIFY--SLNNVNRWLFMV 424 Phthorimaea ope...
YP_950744    347 DnfKQDCKKftGYDEFLCPETELIATMNA-KVCEIEMFMG---RYSGDVINICDIRVANYNPKKAYvnTIMNNMKWLYIF 422 Maruca vitrata ...
YP_001651037 455 --QKDTRVDFDCSADVSVPPVvLKTGVGILRGlNLNFTCKLVTSKMELTVVQMKSKPIS--ISILPISTS-FNLSATLTD 529 Orgyia leucosti...
ABQ51967     425 --QKPTALKLNCGNGMYDKSV-LINGTGVV---TLKQYCKVKTGKSILITRHSSND-----DERVPKIIVsFNFTPFYLP 493 Spodoptera litu...
ABS17588     426 --EKPILVQLNCGTGSFELKT-RINGTGII---TLLQYCKLKTSRSVLVSKHVQL------DESKFKVIQ-FNFSKFYLP 492 Agrotis segetum...
Q7T9Z2       404 --SDPVAAHLNCGSGKYDIET-RLEGSGVL---IMLKYCKLKTSRTVLIGKHKKQK-----KFANFQVVN-FNFSKYLFN 471 Adoxophyes oran...
AKS25366     427 h-DYPVSAHITCKSGGFTNKI-KLYGTGVL---TLLNYCKFRTSRTILMSKHI-NNY----ENEQFTSIP-FNFSQFVLP 495 Clostera anasto...
Q1A4S3       420 n-EKPINAQLNCGSGRYNKQI-TLQGTGIL---TLLNYCKLRTSRSKLMSKHV-LNY----NENACRVVN-FNFSQFLIP 488 Choristoneura o...
AEB00318     419 ngNVPVYATINCESGKLVQRV-KLQGMGIL---TIRRYCKFKTSKTVLMNKHVF-GM----EEGTFTAVS-FNFSRYIIP 488 Clostera anacho...
Q7T5Q9       424 i-DKPVHAELNCGSGRYDKQI-TLNGTGIL---TLLKYCKLRTSRSLLISKHV-ANY----EQETFAIVK-FNFSNFLLP 492 Cryptophlebia l...
Q8JS32       425 g-EKGVRAEFNCGTGKYDKHI-ILRGMGIL---TMLKYCKLRTARSTLTSKHVTSDY----EIDQFKVVN-FNFSGFVLP 494 Phthorimaea ope...
YP_950744    423 --PNSTTLVVHCNDASKFEMT-VQPGVGVMLS-TMSQTCAIRITHDGVTVTVDSRLYVGysTTFWPKKI--FNFNNYIDP 496 Maruca vitrata ...
YP_001651037 530 LDT--FELNTFKSNDDLDHKNLNGMTERLI-------DLRKRMENNTVYTGGDIaDDETTESWFCWFV--SFfglsCRLA 598 Orgyia leucosti...
ABQ51967     494 ------ETNNAILIKNLDFDTLSSVKTSLQ-------NIITSNDKE--IKVIED--DNSNSNWYLHLIs-DY----TVDI 551 Spodoptera litu...
ABS17588     493 PNY----NSNGKIIKSLDHESLSEITHTLQ-------RLVTNEEAQKALDIKEL-DDNSNSNWYLNLFg-NW----WWEV 555 Agrotis segetum...
Q7T9Z2       472 -----ARLATDRVVKNLDFETISHITQQLS-------KLQNTENNDTILNVHKY--SHPYSDWYEIFFnfDW----WFDL 533 Adoxophyes oran...
AKS25366     496 LNY---TINDSNMVKSLDYTVLSSVSHNLK-------KLLTQEEADKSISAISA-DDNSNSNWYSNLFg-NW----WWEI 559 Clostera anasto...
Q1A4S3       489 LNY-----RPYKIVKSLDFTTLTDVTHNLK-------KLLTQEETDSVLKLPPA-DDNSYANWYSNLFg-NW----WWEL 550 Choristoneura o...
AEB00318     489 NDF----DANAWTIKTLNYDTLIDVTRNLK-------KLVTQEQADTALVSPPS-DDYSNSNWYSNLFg-NW----WWEV 551 Clostera anacho...
Q7T5Q9       493 PDG----HLGNKVAKNLDFDSLNDITKNLQ-------RLLTREETDAIINIPNP-DDNSNANWYTNLFg-NW----WWEL 555 Cryptophlebia l...
Q8JS32       495 RDT---KDLGKRVIKDLNYDTLNDVTSHLN-------RLVTQEEADTAISAHTP-DDNTNANWYSNLFg-NW----WWEL 558 Phthorimaea ope...
YP_950744    497 FLLekANTNFLPTIDDFNRSVLLQLSNKFRikdytspPPQHFFRPSKIYTIDET-SDEKDDNI---------------NI 560 Maruca vitrata ...
YP_001651037 599 ESIVATVVLIVVFLFVYKIYR---CLCPGLCSGLcsgfctglctglcsnlqmcrratNTVVRVNENLQY 664 Orgyia leucostigma nucleop...
ABQ51967     552 KIISYVIIFILISAVIVYVKPl--ICCRQTI---------------------------------SRSVF 585 Spodoptera litura granulov...
ABS17588     556 KFVVYIILGILFTMILLYFKRncgCCCTYNNRDV------------------------------MLPIF 594 Agrotis segetum granulovirus
Q7T9Z2       534 KILFYIVCALIVCIIIYNVKKyccWCIPNTKPQL--------------------------------SIF 570 Adoxophyes orana granulovirus
AKS25366     560 KFICYAVCILIIVVLVIKTKQ---TCCGGDKQVV------------------------------PLNMF 595 Clostera anastomosis granu...
Q1A4S3       551 KFIVYSVCIIVVIVFVLKIKN---MCCKGDRVYL-------------------------------SPSY 585 Choristoneura occidentalis...
AEB00318     552 KFVMYAICILIAVVVVLNTKRvcgGCCGSDGTFV-------------------------------LPVL 589 Clostera anachoreta granul...
Q7T5Q9       556 KFIMYVFCVLILLTFVFYLKR---IFCSGQNVVL--------------------------------PIL 589 Cryptophlebia leucotreta g...
Q8JS32       559 KFIAYVIVIIIIAWIVFSLKR---CMCSNSTLIPi-----------------------------LQPKY 595 Phthorimaea operculella gr...
YP_950744    561 IVIMIAIVAALLLLCGLMIFLf--CCIKKRCRQSn----------------------NIIVHYKNNNDF 605 Maruca vitrata nucleopolyh...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap