6SUQ


Conserved Protein Domain Family
TcdB_toxin_midC

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pfam12255: TcdB_toxin_midC 
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Insecticide toxin TcdB middle/C-terminal region
This domain family is found in bacteria, and is approximately 150 amino acids in length. The family is found in association with pfam03534. This family is the C-terminal-sided middle region of the bacterial insecticide toxin TcdB.
Statistics
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PSSM-Id: 371995
View PSSM: pfam12255
Aligned: 22 rows
Threshold Bit Score: 144.397
Threshold Setting Gi: 261371682
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SUQ_A         860 WFNRALKGQLLRSELYGLDD---------STNKHVPYTVTEFRSQVRRLQ-HTDS-RYPVLWSSVVESRNYHYERIA-SD 927 
WP_002210089   872 WLHRALKGSLLRSELYGLDD---------SELATQPYSVNSSRYQVRQIQsSADGiSSPVALPMVLEQLSYHYERIA-QD 941  Yersinia pestis
CCH:MU9_1220   857 sLHYALKGALLREELFDSED---------T---AVPFSVQEHRYQIRLLQqNGDI---ICAAPLLLETLSINYQQSE-KD 920  Morganella m...
Q87X46         879 EMARALSGSVLRSEVFGLDA---------SQRPTVLYSTRSCRYLVRQLQaLSAHrPYASMLPLSLEVITYRYEAEElED 949  Pseudomonas ...
jgi:Dred_0998  885 QAYRALKGQVIREEVYALDYi--------EGRTGHPYTVTETNFHVRLIQpLIGE-NRAVFSVYKKETVSFNYERNP-ND 954  Desulfotomac...
WP_015758326   886 lAYRALKGRVIREEVYALDNm--------PGLTDNPYAVTETSFHVREMQpATSD-QEAVFFVYQKETVSFNYERNP-TD 955  Desulfofarci...
Q0RWZ5         924 EAYRALKGSALRTEVYAEDG---------TARATHPYAVTEQNFTVRRIQaFGPN-RHAVFLVHPRESLTYQYEREP-DD 992  Rhodococcus ...
Q0K1I3         931 EACRTLKGSMLRQEVYADDAdhpgatpdqVQRARTPYTVTEQNFSIRALQpRGAN-RHAVFFTHPCESLSYHYERNP-AD 1008 Cupriavidus ...
CBW76668       861 aMRRALRGRVMREEVYGVDD---------TPAAAHPYTVTEYRYQVRVVHdAPDA---RVLLPMQLEQWSAQYERMP-DD 927  Paraburkhold...
CBJ90394       871 WLHRALKGTLLRREHYGLDG---------TPAAAVPYTVSQSRCQVRLVQaGD----MPVVLPLSAGEITYHYERVA-SD 936  Xenorhabdus ...
6SUQ_A         928 PQCSQNITLSSDRFGQPLKQLSVQYPRRQ-QPAINLYPDt--LPDKLLANSYDDQQRQLRLTYQQSSWHHLT-NN 998 
WP_002210089   942 PQCSQQIVLRCNEYGHPLHSVTINYPRRD-KARISPYSW---LAKEHWDSHFDEQQQQLRITESQQSYHHEI-SD 1011 Yersinia pestis
CCH:MU9_1220   921 IACQQQIVMDYSEYGEALHEITVFLPRQS-GVEENPYPAvtpLQ---WQNSFDDAQTLCWFTETRRLSLSMI-TP 990  Morganella morgan...
Q87X46         950 PMCEHSLNLAWDRYGSTLHSVSVNYARRKkPGDAPPFADp--HQQQWWEASHDDAQQQFYLNEMHAEAIYLD-SP 1021 Pseudomonas syrin...
jgi:Dred_0998  955 PQIQHEFILAVDDFGNVKKSCRVFYPRRAtPKDAV--------------SVVHPEQTKIKAIVDLHSFINNSlDF 1015 Desulfotomaculum ...
WP_015758326   956 PQVQQELCLEVDDYGNTKKSCRIFYPRRPtVSGITT-------------PIIYPEQTRIRATLDIKSFINISkDF 1017 Desulfofarcimen a...
Q0RWZ5         993 PRMSHLVTLEVDEFANIRHSVSIAYGRRVgHQEPAPELSagfR------DMLAHDQTRLHIGAAENLYTNPVhRP 1061 Rhodococcus josti...
Q0K1I3        1009 PRIQHALTLEVDDYGNVLKQAAIGYGRRA-----SPLST----------QWDRERQTTSLLTYTESRVTNAIeSS 1068 Cupriavidus necat...
CBW76668       928 PMMTHQVLLQADQYGYPTDTATVHYPRRT-----NPAPSd---------ECQDTQQQQLRVTRTQQRWIHLNqPN 988  Paraburkholderia ...
CBJ90394       937 PQVTQSIPLQYDSYGHGLWTINVNYPRRLtADSPNPYTAt-aLPDSAWSATFDEQQTLLRLTENRIQMRNQP-DA 1009 Xenorhabdus nemat...
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