5CYB


Conserved Protein Domain Family
DUF3642

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pfam12182: DUF3642 
Bacterial lipoprotein
This domain family is found in bacteria, and is approximately 60 amino acids in length. There is a single completely conserved Y residue that may be functionally important. This domain is from a bacterial lipoprotein, a major virulence factor in Gram negative bacteria.
Statistics
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PSSM-Id: 403420
View PSSM: pfam12182
Aligned: 4 rows
Threshold Bit Score: 67.2901
Threshold Setting Gi: 1064245192
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5CYB_A         68 QPTDIDGTYTGQDd-----gDRITLVVTGTTGTWTELESDGDQKVKqVTLDsANQRMIIGDD---VKIYTVNGNQIVVDD 139
Q8CZ88         88 QPTDIDGTYTGQDd-----gDRITLVVTGTTGTWTELESDGDQKVKqVTFDsANQRMIIGDD---VKIYTVNGNQIVVDD 159 Streptococcus ...
KRK51056       64 LNSDGTGTYVMANptqadihDQLTWKKEKNNYIINLNDSNYDTPID-ARLN-EDNLSLVGNDewpNQSFKRVHGDFDVDN 141 Lactobacillus ...
jgi:Lreu_1022  77 LNENGTGRYVYADknnpdtnDSLTWRKEGEHYLINLEDRDVTNPLT-ATLD-NNKLIVTGSNgwnTETFQKVNEELNLQQ 154 Lactobacillus ...
5CYB_A        140 MDRDP 144
Q8CZ88        160 MDRDP 164 Streptococcus pneumoniae R6
KRK51056      142 FLKEQ 146 Lactobacillus reuteri DSM 20016
jgi:Lreu_1022 155 FLNDM 159 Lactobacillus reuteri DSM 20016
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