Conserved Protein Domain Family
DUF35_N

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pfam12172: DUF35_N 
Rubredoxin-like zinc ribbon domain (DUF35_N)
This domain has no known function and is found in conserved hypothetical archaeal and bacterial proteins. The domain is duplicated in Mycobacterium tuberculosis Rv3521. The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin-like zinc ribbon domain represented in this family and a C-terminal OB fold domain. Zinc is chelated by the four conserved cysteines in the alignment.
Statistics
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PSSM-Id: 403411
View PSSM: pfam12172
Aligned: 103 rows
Threshold Bit Score: 28.813
Threshold Setting Gi: 500133567
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0RMH6         13 TWPADEPELIAGRVPGTDRVLFPRPeH----VMA-DDGSLV 48  Frankia alni ACN14a
WP_012174970  359 RNRKMLLGLVGGKCRECGTPQFPKS-KvcvnPHC-E--AMH 395 Desulfococcus oleovorans
jgi:Caul_3240 359 RDRRTILSLMGGRCRVTGAVQYPKT-DisvsPNArLVGTQD 398 Caulobacter sp. K31
WP_012286945  360 RNQDMILGLVGGRCRETGVVQFPRT-RisvaPNNpGVDTQE 399 Caulobacter sp. K31
jgi:Swit_1856 356 RHRRTITGFVGGLCTACGTRQFPKG-PccvnPDC-R--SFD 392 Sphingomonas wittichii RW1
jgi:Msed_1648  10 RNKDTHYSLVASVCEKCGHVNFPAR-Tv--cSNC-GSFRVT 46  Metallosphaera sedula DSM 5348
Q827F7         14 AGDGNDFRLLGTRCSACASVFFPREdAhcrnPGC-PGGELA 53  Streptomyces avermitilis
jgi:Noca_4132  19 PGHGGVPSLLGSRCADCGTTTFPRQ-Dg--cPRC-GGASMP 55  Nocardioides sp. JS614
WP_011809572   26 AADGRSLDFLFAQCPACQALSFPANaPg--cMHC--GQAID 62  Verminephrobacter eiseniae
Q5P683         28 ADGGAP-YLKGYRCKKCGQLDFPKL-Sp--cPSC-WGEEFD 63  Aromatoleum aromaticum EbN1
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