1LYP


Conserved Protein Domain Family
CAP18_C

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pfam12153: CAP18_C 
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LPS binding domain of CAP18 (C terminal)
This domain family is found in eukaryotes, and is approximately 30 amino acids in length, and the family is found in association with pfam00666. CAP18 is a protein which is derived from rabbit granulocytes. It has two domains, an N terminal DUF and a C terminal Gram negative LPS binding domain. This domain is the C terminal domain.
Statistics
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PSSM-Id: 403395
View PSSM: pfam12153
Aligned: 9 rows
Threshold Bit Score: 26.4627
Threshold Setting Gi: 159162664
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LYP_A         4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30  rabbit
NP_001094194 142 GLLRKGGEKFGEKLRKIGQKIKDFFQK 168 Norway rat
XP_005333139 138 GLLQKGGEKIGEKLENIGRKIKDFFQg 164 thirteen-lined ground squirrel
XP_012667340 138 GFLRRGVEEFGRKLENIGRKIKEFFQN 164 small-eared galago
Q6TN20       138 ELITTGGQKIGEKIRRIGQRIKDFFKN 164 dog
Q9GLV5       137 NFFRKVKEKIGGGLKKVGQKIKDFLGN 163 Rhesus monkey
XP_002813845 140 DFFREAREKIGEEFKRIVQRIKDFLRN 166 Sumatran orangutan
ADX86832     138 ELIQQGGQKIVEKIQKIGQRIRDFFSN 164 domestic cat
XP_011977642 139 DSLQRGGQKILEKAERIGDRIKDIFRg 165 mouflon
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