Conserved Protein Domain Family
DUF3474

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pfam11960: DUF3474 
Domain of unknown function (DUF3474)
This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 126 to 140 amino acids in length. This domain is found associated with pfam00487.
Statistics
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PSSM-Id: 403244
View PSSM: pfam11960
Aligned: 17 rows
Threshold Bit Score: 155.659
Threshold Setting Gi: 242036047
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAX01462           3 AGWVLSE-CGLRPLPRIYSRPR----------IGFTSKt-------------------TNLLKLRElpdsksynlcssfk 52  castor bean
KRH00264           2 ATWILSE-CGLKPLAPVIPRPR----------TGAALSstsrvef-------ldtnkvVAGPKFQP-------------- 49  soybean
KRH75959           2 ATWVLSE-CGLRSLPPVFPRPT----------RPISCQkpskfrf-------lsinkgVADLNLQPrg------------ 51  soybean
CAX01516           2 ATWVLSE-CGLRPLPPVFPRST----------RPISCQkpsksrf-------lstnkgVPDLNLQArg------------ 51  soybean
ERN05262           2 ASWVLSD-CGLRPLPKVSPFPKltprlrhslpLGFSAK--------------------RADLNSKVcr------------ 48  Amborella t...
Q7X7I9             2 ASWVLSE-CGLRPLPKIYPKPT----------IGFSSSvs----------------vsATSLNLRRi------------- 41  tomato
JCVI:AT5G05580.2   2 ASSVLSE-CGFRPLPRFYPKHT----------TSFASNpkptfkf------npplkppSSLLNSRY-------------- 50  thale cress
XP_009146749       2 ANLVLSE-CGIRPLPRIYARPR----------STPLSTnkptsfkf-----rqspsspRFRLNS---------------- 49  field mustard
P46310             2 ANLVLSE-CGIRPLPRIYTTPR----------SNFLSNnnkfrpslssssyktsssplSFGLNSRD-------------- 56  thale cress
XP_009384918       2 ASWVLFQgCGVRLLPAALPRPR----------SGIPPAaklkplr------rtrlpssTSCLc----------------- 48  wild Malays...
CAX01462          53 vsSWSNSKQSN-WALNVAVPVNVSTVs---gEDDREREEF-NGIVnvdeGKGEFFDAGAPPPFTLADIRAAIPKHCWVKN 127 castor bean
KRH00264          50 --LRCNLRERN-WGLKVSAPLRVASIe----EEQKSVDLT-NGTNgvehEKLPEFDPGAPPPFNLADIRAAIPKHCWVKD 121 soybean
KRH75959          52 -fTCYNFRERK-WESGVSAPLKVATTe---gEEEEGINGA-NGVV----EEVPEFDPSAPPPFKLADIRASIPKHCWVKD 121 soybean
CAX01516          52 -lTCCSFRDRK-WELGVSAPLKFATNe---gEEEERTNGAnNGVG----EEVSEFDPSAPPPFKLADIRAAIPKHCWVKD 122 soybean
ERN05262          49 vvSVGRGGLRD-WKLRVSAPLDLKVVsfderEIEGE-----------------KFDPAAPPPFKLADIRAAIPKHCWVKD 110 Amborella t...
Q7X7I9            42 -sPSPIRTDRNcWALRVSAPLRIQIAg----EEEEQTTN----------NGDEFFDPGAPPPFKLSDIKAAIPKHCWVKN 106 tomato
JCVI:AT5G05580.2  51 ---GFYSKTRN-WALNVATPLTTLQSp---sEEDTE-----------------RFDPGAPPPFNLADIRAAIPKHCWVKN 106 thale cress
XP_009146749      50 ---------RN-WALNVTTPLTVDSSssppiEEEPKTQ---------------RFDPGAPPPFNLADIRAAIPKHCWVKN 104 field mustard
P46310            57 ------GFTRN-WALNVSTPLTTPIFeesplEEDNKQ----------------RFDPGAPPPFNLADIRAAIPKHCWVKN 113 thale cress
XP_009384918      49 -cSVGLAGRRA-WALRVSAPLQVAPL-----EEGSAMGSG---------VKEEAFDPGTPPPFGLAEIREAIPRHCWVKD 112 wild Malays...
CAX01462         128 PWRSMSYVLRDVVVVFGLAA 147 castor bean
KRH00264         122 PWRSMSYVVRDVIAVFGLAA 141 soybean
KRH75959         122 PWKSMSYVVRDVIVVFGLAv 141 soybean
CAX01516         123 PWKSMSYVVRDVIVVFGLAA 142 soybean
ERN05262         111 PWKSMSYVVRDVVVVFGLAA 130 Amborella trichopoda
Q7X7I9           107 PWTSMSYVVRDVAIVFGLAA 126 tomato
JCVI:AT5G05580.2 107 PWMSMSYVVRDVAIVFGLAA 126 thale cress
XP_009146749     105 PWKSMSYVVRDVAIVFALAA 124 field mustard
P46310           114 PWKSLSYVVRDVAIVFALAA 133 thale cress
XP_009384918     113 PWRSMSYVVRDVVVVFGLAv 132 wild Malaysian banana
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