Conserved Protein Domain Family
DUF3452

?
pfam11934: DUF3452 
Domain of unknown function (DUF3452)
This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 124 to 150 amino acids in length. This domain is found associated with pfam01858, pfam01857. This domain has a single completely conserved residue W that may be functionally important.
Statistics
?
PSSM-Id: 403219
View PSSM: pfam11934
Aligned: 47 rows
Threshold Bit Score: 86.8779
Threshold Setting Gi: 298715379
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CBJ27990       49 ADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVagrl------pgpLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNErds 122  Ectocarpus si...
XP_004979395   74 KGRKEGSGVRLCEILKSCKLKYDDFFKEMQQLglkiekilesrygRDWEGQLELKQLEGLVNLLADASRFYRKAYNE--- 150  foxtail millet
Q2R374         72 ETKAGSSGVRLWEILKGCKLKYDDFFKESQRLasridqvlgsrygSDWEARLELKQLENLVNLLADASRFYCKAFNE--- 148  Japanese rice
XP_009403804   96 QEGQKEGRITLCQILRACDLAIVDFFNELPLFplkaghiltdlygSDWDKRLELKELQENVTQLIDLSKFYDKAFGE--- 172  wild Malaysia...
XP_006844661   94 tHEKIESGFTLSQILRVAKLNAVDFFKEMPQFflkagliltnlygSDWEKRLQAKELQANFVHLAVLSKYYKRTYLE--- 170  Amborella tri...
XP_010648448   88 QQGNDENGFNLCQILRVSKLNIVDFFKELPQFivkvgpilgnlygPDWEKRLEAKELQANFVHLSILSKYYKRAYLE--- 164  wine grape
B9GLX8        109 QQKSDDPGLTLCQILRLAKLNIVDFFKELPHFivkagpilsniygADWENRLEAKELQANFVHLSILSRHYKRACRE--- 185  black cottonwood
KRH13310       85 KEDAENTGLSLCRILRAAKLNIADFFKELPQFvvkagptlsnlygTDWENRLEAKEMHANAIHLKILSKYYKRVFGE--- 161  soybean
XP_002884896   91 QSVSGDNGFNLCQILRALKLNIVDFFRELPQFvikagsvlgelygADWENRLQAKELQANFVHLSLLSKYYKRGFHE--- 167  Arabidopsis l...
XP_009412780   95 KQEKEENSVSLCQILRAFKLNVVEFFKEMPQFclkagyilsglygSEWEKKLELKELQANIVHLSLLSRYYKRAYEE--- 171  wild Malaysia...
CBJ27990      123 lfppaifgpssaafgndgdsnnmtngVLPSQAaennkgggagaDDTSdDHDINSAAvaaagfplplppSDPQALPRLGWY 202  Ectocarpus si...
XP_004979395  151 --------------------------LFSSAS----------------TDQEPGLA------------TSTPDYILFGWH 176  foxtail millet
Q2R374        149 --------------------------LFLSPS----------------TDQEPGST------------TNIPDYIRFGWL 174  Japanese rice
XP_009403804  173 --------------------------FFSTSNm----------RRKDqDSAASGSV------------GNVQDFYRFGWL 204  wild Malaysia...
XP_006844661  171 --------------------------FFLPSD-----------PNDMkQSVVAIGA------------EPISDYLRFGWL 201  Amborella tri...
XP_010648448  165 --------------------------FFSTSG-----------SNLDkQSSVISAS------------GYVSDYHRFGWL 195  wine grape
B9GLX8        186 --------------------------LFLTSD-----------ASSDkQPAISNEA------------THVSDHHRFGWL 216  black cottonwood
KRH13310      162 --------------------------FFVSTD-----------TNAEkNSSIT---------------VHASEYHRFGWL 189  soybean
XP_002884896  168 --------------------------FFLTYD-----------ANAEkNSANSS--------------TYLADSYRFGWL 196  Arabidopsis l...
XP_009412780  172 --------------------------LFLQND-----------AKSSqDSAVSCAK------------DYVSDCHRFGWL 202  wild Malaysia...
CBJ27990      203 LYLLTKDvLGFRsSNAAFVRCLNLVLAALGAV 234  Ectocarpus siliculosus
XP_004979395  177 VFLMLRS-RSPE-LFKDLVSCIHGLVAVLAIL 206  foxtail millet
Q2R374        175 LFLILRS-KSPE-LFKDLVSCIHGLVAILAIL 204  Japanese rice
XP_009403804  205 LFLALRT-HVFT-HCKNLVICTKGLVSILAIL 234  wild Malaysian banana
XP_006844661  202 LFLALRI-HAFS-PFKDVVTCTNGLVSILAIL 231  Amborella trichopoda
XP_010648448  196 LFLALRV-HAFS-RFKDLVTCTNGLVSILAIL 225  wine grape
B9GLX8        217 LFLALRV-HAFS-RFKDLVTCTNGLVSVLAVL 246  black cottonwood
KRH13310      190 LFLALRV-HAFS-RFKDLVTCTNGLISILAIL 219  soybean
XP_002884896  197 LFLALRN-HAFS-RFKDLVTCSNGVVSILAIL 226  Arabidopsis lyrata subsp. lyrata
XP_009412780  203 LFLALRI-HAFS-RFKDLVTCTNGLVSILAVL 232  wild Malaysian banana
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap