Conserved Protein Domain Family
DUF3399

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pfam11879: DUF3399 
Domain of unknown function (DUF3399)
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 100 amino acids in length. This domain is found associated with pfam02214, pfam00520.
Statistics
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PSSM-Id: 403174
View PSSM: pfam11879
Aligned: 23 rows
Threshold Bit Score: 97.8239
Threshold Setting Gi: 1249049078
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005337679 442 LHSKRNGLLNEALELAGTPEEE-HVGKTTS-LIESQHHHLLHCLEKTTNHEFIDEQMFEQNCMESSMQNYPStRSPSLSS 519 thirteen-lined ...
XP_014345495 444 LQSKRNGLLNEPLEQSPNVEEQaLVTKSGS-SFERQHHHLLRCLEKTTNHEFVDEQTYDESCMEVSAVNRPGsRSPSLSS 522 coelacanth
ELW65557     133 MQSKRNGLLSNQLQ--SSEDEQaFVSKSGS-SFETQHHHLLHCLEKTTNHEFVDEQVFEESCMEVATVNRPSsHSPSLSS 209 Chinese tree shrew
XP_007507763 452 LQYKRNRGLED----QDSTRRPaLStRSCS-AFEQQHHHLLHCLEKTTSHEFTDESTFSEALGVVSLGGRTS-RSTSVSS 525 gray short-tail...
XP_006005474 445 MQYKQNGAFED-----PDNGSQaLCiRNRS-SFEQQHHHLLHCLEKTTNHEFTDEQTYSEVCMAESMGYRTS-RSTSVSS 517 coelacanth
XP_006633378 444 MQSKRNGLLTDSLEQASKEAGQaLVTKVSS-SFERQHHHLLHCLEKTTNHEFVDEQTYETSCMEVSTAKQPRsRSSSVSS 522 spotted gar
Q5VSI1       444 LQYKRNGMLVDMEEEASKEAGQaLVCKANP-TFETQHHHLLHCLEKTTNHEFVDEQTYETSCMEVSLAKPSMsRSSSMSS 522 zebrafish
XP_007541882  78 MRYKQNGLLIDALEEaskEAGQaLVGKSASpPFESQHHHLLHCLEKTTNHEFVDEQTFQANCMEISVVNKSGsRTSSLSS 157 Amazon molly
XP_008116591  36 lqykqnggleD-----RDPDTHaLAvRNRS-AFEQQHHHLLHCLEKTTSHEFTDEHSYSEFCLTEPLGYRTS-RSTSLSS 108 green anole
XP_007245920 445 lqykedgglQD-----HDSDSAaLCLKNRS-SFEHQHHHLLHCLEKTTNHEFTDELTYSEMCMTESVGYRTS-RSTSLSS 517 Mexican tetra
XP_005337679 520 H-PGL---------TTTCCSRRNK-KTT-HLPNSNLP 544 thirteen-lined ground squirrel
XP_014345495 523 Q-HGL---------TSSCCSRRSK-K-NfRIPNSNVi 547 coelacanth
ELW65557     210 Q-QGV---------TSTCCSRRHK-K-TfRIPNANIS 234 Chinese tree shrew
XP_007507763 526 Q-AVMgssarasslISSCCPRRTKqRRAiRLANSTAS 561 gray short-tailed opossum
XP_006005474 518 H-QGL---------GTSCCPRRAK-KRAiRLANSTVS 543 coelacanth
XP_006633378 523 Q-HGL----------TTCCTRRSK-K-SfRLPNSNMl 546 spotted gar
Q5VSI1       523 SpHGL----------SSCCTRRNK-RKSfNVPNSNMA 548 zebrafish
XP_007541882 158 S-PHG---------LSSCCSRRHR-K------KSSFS 177 Amazon molly
XP_008116591 109 Q-QGSkg-----glSSSCCPRRTK-RRPtRLTNSTMT 138 green anole
XP_007245920 518 Q-QVV---------SSSCCPRRAK-RRAiRLANSTVS 543 Mexican tetra
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