Conserved Protein Domain Family
DUF3352

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pfam11832: DUF3352 
Protein of unknown function (DUF3352)
This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.
Statistics
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PSSM-Id: 403132
View PSSM: pfam11832
Aligned: 95 rows
Threshold Bit Score: 212.528
Threshold Setting Gi: 123620495
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009556541       10 LVAVVVVLLLIGIVGFYWITAQSp---LKLLAKGEGKIPSAAIFVPKQAPVMLSLLVNPKDLVAFRQvVAAPSRRKQART 86  Oscillator...
CAK29177           12 VVAIAISLVGLGAAGWWWLQSQSp---LKLQHQSLTT-PATTRFLPTDANLTLILEADPGRLPDYGRaVAPMRQRRQAAD 87  Synechococ...
jgi:Cyagr_2870     10 LLALVLVVFGLGLGGWWLVWQRSa---LRLQRLPLEV-PRAARFVPRDAPFSLHLFTDGDQPLDYARaVAPPRQRRQAAE 85  Cyanobium ...
CAK24720           36 LVASAMVLLTLALGVWWAMARQSp---LRIVDRPLEL-TRAARFMPRDAELTFNWLVDPSRIPAYARaVAPVRQREAVSE 111 Synechococ...
Q7V4D4             10 VLATVFVLFSLVAGLGWAMARQNp---LRLVDQPLEL-PRAARFVPRDAALAVHWLMDPVRVPAYAQaVAPARNRRKARD 85  Prochloroc...
Q7VE28             12 ITLTILSLVAVT------LVNQTqqkeSLILDTKELDLPESAQYIPSNAYLTIHFNINPNKIPDYIEaEASKKSKSQARK 85  Prochloroc...
jgi:GEI7407_2660   14 TLSAAVLLIGG-GAVAYWLM-QR----RP--VTTDLP--PGSAVIPEEAIATISLSTDAAQWDRLRA-FGTPKSQKAFDT 82  Geitlerine...
jgi:Cyan7425_3609  14 LLGATGVVIGG-GAIAYLFWKKP-------PLAAVLP--VGSNLIPQSALMSLSLSTDPAQWQQLQQ-LGTTGAPRALAD 82  Cyanothece...
Q8DII7             20 vggVALVIVGTATAAGVFLWQRF----------SQRPIAPGMAIAPNNALLTLTLPTDPQPWEALAQ-TGLLRAQPWLNP 88  Synechococ...
WP_015123434       14 wIAGGMVLVGVAGAGIWWWQTQA--------KLGQLP--DGVTLIPESALYTITVTTEAPPWQWVQA-AGLFQSQAWLRG 82  Synechococ...
WP_009556541       87 ELSQFRQSLLGNTGLDYDRDVQPWLGDEVTLAITTLDIDRDR-----------SNGKQPGY---LLAIATHDPEQSREFL 152 Oscillator...
CAK29177           88 QLEHLRDALFAAAGLDYATELADWLGDESALAVTSGDTP--------------------GW---VLALSSRDDDGGRQFL 144 Synechococ...
jgi:Cyagr_2870     86 AVGRLRDGAFAAAGLDYGTELSSWLAAPVGLALFEADTGGAA-----------GATRRGGW---LLVLGSRDDGGARRFL 151 Cyanobium ...
CAK24720          112 STRQLRDGAFALAGLNFNDELRDWIGPQVSLAVLDDSTANA------------GDPGALGW---VLALSSQDDDGARRFL 176 Synechococ...
Q7V4D4             86 GAQQIRDGAFALAGLDFESELVDWLGPQVSMALLEPD----------------GPEASMGW---LLVLESRDQDGARRFL 146 Prochloroc...
Q7VE28             86 EGIEIRDGLFALIGLDFNKDLSEWVSNDFSFSIFNSK----------------ENRINKGW---ILIFEGININESSNFL 146 Prochloroc...
jgi:GEI7407_2660   83 QLTQWRDRLFSANGYNFQRDIRPWVGREITVAVLASAPPGEAkaqtgssatppAPIDPQSL---LWVMPIANPERLQPLL 159 Geitlerine...
jgi:Cyan7425_3609  83 QLGKLQTQFFSDRKLDYTRDIQPWVGPQSTLAVFPLTAATI------------TSSQDQPQ---VWVLPIAQPDLAQSTL 147 Cyanothece...
Q8DII7             89 TYDPLSPEGVNLAQLDYLKDVRPFIGDRATLVLLPITP---------------ESVKESPVppyIWVVPTLNVPMGEQLL 153 Synechococ...
WP_015123434       83 PWGPVSPEGIKIGDLDFTRDILPWLGAQATFTGLPITPATA------------LQSSDSPV---AWILPIPDQAKIEPLL 147 Synechococ...
WP_009556541      153 QLFWQKraiAGT-DLTFeQYKGVKLI--YNEvpvnPKLEGkkpkknqdfefltpasllpaptlASAVV------GNQFVL 223 Oscillator...
CAK29177          145 QRFWQSrslAGG-GLDItRYRGLGVI--SSR----GQQSQgrpstssp--------qaehpplASALI------NDQLVL 203 Synechococ...
jgi:Cyagr_2870    152 QRFWQTrslAGT-DLQIsTYRGLGLI--SGR----GAL-Lgrtp----------------mplATALV------DDDLVL 201 Cyanobium ...
CAK24720          177 QRFWQTrslAGT-DLQItRYRGMGVI--SGR----GAL-Lgrdp----------------qpiATALI------DDDLLL 226 Synechococ...
Q7V4D4            147 QRFWQArslAGT-DLQIsRYRGMGVI--SGK----GALrgrn-----------------pqplATALI------DDDLLL 196 Prochloroc...
Q7VE28            147 NEYWENqniNGA-EIEHeSYQGQEIL--YEK----AAGSEieg-----------------rklSMAML------NNNLIL 196 Prochloroc...
jgi:GEI7407_2660  160 NKP--P---KGEaWSEE-TYKEIPIkttPAG----TATP------------------------YAMAKl-----GEEYLV 200 Geitlerine...
jgi:Cyan7425_3609 148 NRLLSS---STAkLNQR-TYKGVDVretAAK----VPHP------------------------YAIAVl------NQAIV 189 Cyanothece...
Q8DII7            154 QSVIGDpi---------tEIKEVKIfraKGI----LPDP------------------------HSGAIallkhqDQAYIL 196 Synechococ...
WP_015123434      148 NTLKQQ--------TQR-DYNGVPIynvPGP----LGEV------------------------AGQGItlitqgEKQYLA 190 Synechococ...
WP_009556541      224 FANDPKVLRDAITNVQaAELNlnNAQFYTQALETLTQPRI-GLTFVN--LPGLAGWlETEAithakdkpgtvEQGATTKG 300 Oscillator...
CAK29177          204 LASSRGQLEDALDASQeEARNlaGDPLLAQWLDAGRQ----GIALLRgdRQGIEQLlRLPA------------SWSTDQP 267 Synechococ...
jgi:Cyagr_2870    202 IASGRGVLEQALDVSQiDELNqaGQPGFQEGLRRLGT----GAALVQaaPDALERWlGLPL------------PAAADQR 265 Cyanobium ...
CAK24720          227 LASGRGVLEQALDVSQlESLQlqGDEGLANDLRSLGS----GVAFLTasPAAMQRWlGVPA------------VIANRGD 290 Synechococ...
Q7V4D4            197 LASGRGVLEQALDVSQlADQHqlGDHELVEIVRQLGD----GVALMVasPPALHSWlGLPK------------PLSQRED 260 Prochloroc...
Q7VE28            197 ISSNKKILQEAIDVSIdSTKNqlGDYQKKDLIKNLKN----GIALIIasPDALESFlEVPQ------------NIAQKVD 260 Prochloroc...
jgi:GEI7407_2660  201 VSTSVEGVQQAIDTFK-GDRSlvTTPGFVDALANLQTPPPiFRVYLNvpALATNTA-ATLAqpf------ppQAISLLRQ 272 Geitlerine...
jgi:Cyan7425_3609 190 FTSAPALIDQVIDTAQ-GQPSlqQLSRYIPAWEEVYVPDAfARLYINlpTAVDQTS-STPSp---------aPTANQAPR 258 Cyanothece...
Q8DII7            197 WSQHQSALQQVIATAQ-ANNGiaSQPTYQRAIKGLSDHRPlVELYVNlpTFLASQM-AAPEg----------SLPEPPRE 264 Synechococ...
WP_015123434      191 WSNINAALEQVIDTAQ-GKPAlaQVSRYQDAVIATGGEGPqAQFYLNipAYTAQNTp---------------SPTPPDSE 254 Synechococ...
WP_009556541      301 YQTLAIALELDRRGLLAETAmtgvdtkAAIAPAL-----SKPV--GALQYLPTLS----PLVASGTNLD--------RVW 361 Oscillator...
CAK29177          268 IEQFVGSLQLDGAGVRLAAQlq------------------------------------tSSGASIAPLSrrdqqvlgNLN 311 Synechococ...
jgi:Cyagr_2870    266 PGGLLLALRPDGRSLRLSGLlel--ppQ-----------------TTLPQVGADD----DLGRALRAALrrpsaslaLVQ 322 Cyanobium ...
CAK24720          291 LTGLVAGLATQGTDLDLKALvrfrdevIp----------------AADERSDAEA----LLAGAGGDAHal-----aLLS 345 Synechococ...
Q7V4D4            261 LLGLVAALKPEGSDLAMEGLlrfqqplE-----------------AVASEVGAADglaqLTTSAGGQAEal-----aLLS 318 Prochloroc...
Q7VE28            261 LNGFVASIIPKGKNIYIDSKfkfkeqlE-------------------SKEIVNKN----EINLFGEEIYnsndiaiiNNT 317 Prochloroc...
jgi:GEI7407_2660  273 NQGMVAHAVLQEEGVLFQGv-------sWLRPDSdrkhaIANDagELPSRLPANT----LMMLSDGNFQ--------RLW 333 Geitlerine...
jgi:Cyan7425_3609 259 LQGLAANLSLSSGQLHLQSl-------tWLKPDSpsqapLENRpqQLAQRLPANT----LAVYTGSNFQ--------QFW 319 Cyanothece...
Q8DII7            265 LQGIVLTADMTPEQIEVEAv-------tW-RPEQnqalvREGQsrELSRLVPETT----LAFYATGSFK--------NLW 324 Synechococ...
WP_015123434      255 LAGLAAALRFQDNQLRIKAi-------tWLPEKSerallPEANvsQIPQKLPGTT----LATFTTSNFQ--------ASW 315 Synechococ...
WP_009556541      362 RELSTSL--SS-FPTV--SQLINQPLQALEKEWKLN--LPQDVFSWVTGEYALGSLPPQaitngeqttpgkkrkpkretl 434 Oscillator...
CAK29177          312 QPVQRLSlsRP-SGPL--A----PLFNLTAASDD------ILLPALLEGEQPL-LEAQL--------------------- 356 Synechococ...
jgi:Cyagr_2870    323 DP-AAI----A-AIPL--LQ---PLLTRMAGGAGAAgsLPALVVASDGG--PL-LAA----------------------- 365 Cyanobium ...
CAK24720          346 AP-QALInpDS-QNPL--AQWIAPALRRALESSTAE--GAAAVAALDSG--PL-LFQ----------------------- 393 Synechococ...
Q7V4D4            319 SP-SRLLdpSD-QDPL--VQWLGPLLRQQLTANEVS--SAATIAGLDDG--PL-LWL----------------------- 366 Prochloroc...
Q7VE28            318 QQILNDN--SSdIYSLliGKALRQYLINLESPIATN------LIELSKGQLVLI-------------------------- 363 Prochloroc...
jgi:GEI7407_2660  334 ESYEPAA--EA-NPNA--PFSPSWLKEALQSTVGLD--WEKDFLSWMEGEASLALVPTTssa------------------ 388 Geitlerine...
jgi:Cyan7425_3609 320 QTYGQAS-----ITPLptPLQAEQIRTNFQAATGLN--FDRDLVGWMNGEFAAALVPADa-------------------- 372 Cyanothece...
Q8DII7            325 QNTPASV--KE------------TIASTVKDLTGLD--WQQAFVPWMDGEFAAAFVPLPa-------------------- 368 Synechococ...
WP_015123434      316 QNAPQDW--QN------------SISQGFQQLSGLN--LEQEVLPWLKGEFALAIVPVPna------------------- 360 Synechococ...
WP_009556541      435 teLAENDWVFVAERnkENASQHAIA---QLDEIAKKQG-YSVGAVQLGEHTVSAWTKLTPsglFSktlqa----evqgVH 506 Oscillator...
CAK29177          357 --QDSKAWLIGSSQsaPPAA--------SLNEALAEQG-FDANNLD----GLQVWSHLt----GQsdrqgqlqatvagAT 417 Synechococ...
jgi:Cyagr_2870    366 --ASGERWLLGTAAdrPEAA--------AVEASLAADG-LIAAPLEVEGRSLLVWTRLRAgptRRdgraeqlqapllgWR 434 Cyanobium ...
CAK24720          394 --EGEAGWLLGSRAdaPSPD--------AVSRQLEQGG-LVGSTLDADGQSLQVWTRLVRqrrHGeeslt---adlavAL 459 Synechococ...
Q7V4D4            367 --QQPEGWLVATKQdyPAVS--------VVDDALTEQG-FIRSDLPFDDKSLQVWTRLARqqsSTknlle---aqlgvAL 432 Prochloroc...
Q7VE28            364 --NKESGWLIKSLD---------FSlipIVDQILISQN-FVKSTLNIKDKDITVWNKLETik---------------rGD 416 Prochloroc...
jgi:GEI7407_2660  389 ppNLPVGLMFLVEAsdRSAAEETMA---KLDSTMAEKYrLKVNEARVNGQPVVNWTSEYGa-iTV-------------TH 451 Geitlerine...
jgi:Cyan7425_3609 373 -sGRGVGLVFLSQTgdRSGAEKAFA---QLNQVMQQKRqWLVKTSTVENQPVTTWKVPPGl-pVA-------------TH 434 Cyanothece...
Q8DII7            369 -lGNVPSLLFLAQTsdRPQASQTLS---QLDTQIRDRLrWQVQQTATDPQPLTTWRLPPGl-pVG-------------QH 430 Synechococ...
WP_015123434      361 -rLNVVGLVVVAQTkdRPKAVATLE---KLDQTAQQRa-WQVTKDT--EKQTTTWTMPPGi-pLG-------------QH 419 Synechococ...
WP_009556541      507 TT------------VGNYELFATSLP--ALQTALDA----VNNSLV-----------NDD-RFQQAI---APL--QHPNN 551 Oscillator...
CAK29177          418 GV------------AQSNRWWSNSLD--GLRAQLQGhgsgGVPSELle-------rlNPS-TGAIAL---LGA--DGRST 470 Synechococ...
jgi:Cyagr_2870    435 WQ------------RGDLAWWGESLG--QLE-SLEGpgskGAPQPQdple---alaaPGA-ALQWAL---DGP--PAR-- 488 Cyanobium ...
CAK24720          460 EH------------GSGFNWWGQTLE------GLRQrrsgSDPSALkqhlqelrslvKAPiTQQLAL---SAD--PSR-- 514 Synechococ...
Q7V4D4            433 AQ------------EPDQAWWGQTLA------ALQQrkqgKALQPRlrqln-nlnrdDRPlTQQLVL---GAS--PGR-- 486 Prochloroc...
Q7VE28            417 GYilspkigiilskDSNKLLWTNTLS--SLDKENNSksivERSNIL-----------KNS-EFNNFItvkQQLslGQRSS 482 Prochloroc...
jgi:GEI7407_2660  452 GW------------LSGNVGFFTLGVgdTIAQTINPe---PAAPLS-----------ENS-LFQRSL---PSNqlQQPFN 501 Geitlerine...
jgi:Cyan7425_3609 435 GW------------LDQNTAFLTLGT--NITPTILPq---PQQPLA-----------QAS-LFQAAT---ASV--LKSNS 480 Cyanothece...
Q8DII7            431 GW------------LNDQILFLGLGPlmDMSRR-------PERSLA-----------DSP-LYRAVL--------PQPKD 471 Synechococ...
WP_015123434      420 GW------------LDQDTLFIALGP--NLTEALLPr---PNPPLS-----------QGP-LFRATL--------PNPGS 462 Synechococ...
WP_009556541      552 GYLYLDWNESRPllERRF--PFLKVIELA--GSPLFNHLQSLTLSSYG---RNQGIQ--RGAIFLKL 609 Oscillatoriales cyanoba...
CAK29177          471 AELLKPWP------------LWRGLQLLA--GQRLGPSLQGAALALSQd----------QSSAELDV 513 Synechococcus sp. RCC307
jgi:Cyagr_2870    489 -DLLASWQ------------PWQRLTALA--GGPLSDPVVGLALALTGe----------SGGLTVDA 530 Cyanobium gracile PCC 6307
CAK24720          515 -DGLAQWR------------PWILLQGLG--GRALSPAVQSLTLAAAPdsaSSQSGE--SSSLRLHA 564 Synechococcus sp. WH 7803
Q7V4D4            487 -VQLQHWR------------PWTLMQTLA--DGSLQPSVQGLAMAVGPdqdEQ------SSSLRMRA 532 Prochlorococcus marinus...
Q7VE28            483 QKILNHWK------------PWQLLKTVA--SKSSLPNINRLNLALGE---EEAEDSilKVRGMLSI 532 Prochlorococcus marinus
jgi:GEI7407_2660  502 GRFFIDVDRTLE--ALKp-wV-----QLPesQRTFIEAMRTIGITAAI---RDGRNT--RFDILLRL 555 Geitlerinema sp. PCC 7407
jgi:Cyan7425_3609 481 GQLFIDIPRTVSvlEGTPllP-----KLSpeVKKAVQGIQAIGITSAR---NNDWST--RYDILVQL 537 Cyanothece sp. PCC 7425
Q8DII7            472 TQFYLNLSNLQSl-QNNLllP-----ELApqVARSLQPFAALGITSHV---RDNQFT--HYIARIRL 527 Synechococcus elongatus
WP_015123434      463 SQLFVDFNRTFSltQNSPilP-----QLAppFQQALQPFQGLGIAGRV---RNSWSQ--EYEIRLNL 519 Synechococcus sp. PCC 6312
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