Conserved Protein Domain Family
Glyco_hydro_cc

?
pfam11790: Glyco_hydro_cc 
Glycosyl hydrolase catalytic core
This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.
Statistics
?
PSSM-Id: 371727
View PSSM: pfam11790
Aligned: 36 rows
Threshold Bit Score: 184.475
Threshold Setting Gi: 121801962
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_011394129  665 IFTpn--sdWPK--------DDLVW---ITGPNNLTWY-HNYQSLPSSESNYAAlsq-nqIEFVPTMWGGNEnd---tDF 726  Neurospora cr...
Q54TQ9         27 GSDp-----NSD--------SAKCN---DIKDLNVAWY-YNWDKKPTCNAGIPG------VEFIPTIWGSGS------LP 77   Dictyostelium...
Q0CZT6         32 VNIvfngpaVGDkigpgshpDSQFFswfSKMPAAKNWItFNEHEYE---------------KKIPMLGDNEDav---lKA 93   Aspergillus t...
Q2UDT9         33 VNVvfnighGGY--------TKQRW---EKIHSASNWLtFNFGFDE---------------KQIPMLGNNKTav---dDA 83   Aspergillus o...
Q098D0         39 SY-------GYH--------SAADM---TALSAGISWW-YNWSPQPEAGAASVAps--vgVSFVPMVWGGTPn----aDQ 93   Stigmatella a...
Q880J1         69 AY-------DIA--------QPADL---SALSAGVSWW-YNWSPKPHDRLASYDyasmygVDFIPMIWNDNVd----dGQ 125  Pseudomonas s...
Q21GJ5        742 GF-------GHH--------SVADF---EAISQGISWW-YNWSIKPDSLIQDVYqn--ygVEFVPMAWNGGFd----dQA 796  Saccharophagu...
Q21KS2         95 AY-------GYH--------SENDL---KAMQGKVKWW-YNWDTQADANVKENYas--ygYDFVPMAWDENFn----eEA 149  Saccharophagu...
Q5K893        195 SYTpngikaGVT--------GDDPL---SFLQGHIGWY-YDWNATPTGSASGA--------SPANMLWGAGTvdstdaSR 254  Cryptococcus ...
WP_020459583  161 STWyfdkiaPSM------------------TEAGVSWF-YTWGAAPERIAAPAG------VEFVPMIWGPGSvt---pQT 212  Frankia sp. E...
XP_011394129  727 LGNVTALmgvdsskdedkdktkrasdkrnITHVMTFNKPDQ--PFdvgGSEMEPRVAAKAWIKNIIPlrrlGVKVGLPLV 804  Neurospora cr...
Q54TQ9         78 IGNLPNG----------------------SEWLIGFNEPNY--NN---QANLTPKQAADLWPQLEAT----GRKLVAPGV 126  Dictyostelium...
Q0CZT6         94 IKMVTSAn--------------------pPEFLLTFNEPDW--DYktgKTKLTPQAAAELIEPLLNTta-kHTKFIAPVP 150  Aspergillus t...
Q2UDT9         84 IDAVNGPn--------------------pPDFMLTFNEPDNlyGShprKVILQPEEAANLIKPLLRRrg-nHTKFIAPVP 142  Aspergillus o...
Q098D0         94 LAAQIPAg---------------------AQYLLGFNEPNF--KS---QANMTPSRAASLWPVLEDVarrkNLKLVSPAV 147  Stigmatella a...
Q880J1        126 LKLYLQAhp-------------------aIRYLLVINEPNL--LD---QANMTPEAAARFWPRLEQIaaqtGVKLVGPAM 181  Pseudomonas s...
Q21GJ5        797 MRDYINAhr------------------ddVKYILAFNEPNF--LE---QANMTPSQAAAEWPRLEAIadefGLKIVSVAM 853  Saccharophagu...
Q21KS2        150 LRSFLDNhp-------------------dVKYLLGWNEPNF--ME---QANLTPAEAAAHWPVLEAIaqdyNLKLVAPAV 205  Saccharophagu...
Q5K893        255 LAAFQALtt-------------------aPQYIIGFEEPDC---StsgSSNIGVSDAASLWDSTIAPwkdqGSILISPSM 312  Cryptococcus ...
WP_020459583  213 LATVKAN----------------------GRTLLGFNEPDL--RG---QADMPVQTALDLWPQLEAT----GMRLGSPAP 261  Frankia sp. E...
XP_011394129  805 NQPYTSqtk--reEGNKS-----WLDMFFAN---CSglldkvedaeekTC--GFDFVPVYSF-------GD-FEMLEERV 864  Neurospora cr...
Q54TQ9        127 ADCGQQl------GGGCTystldWYSQFLGN---CS------------KC--RIDAVSLHLYy------CN-ADDMMNKI 176  Dictyostelium...
Q0CZT6        151 AFQMSs-----------------WLPEFYEK---CK-------------CrdRFYAHSVHIYn------HT-INETKTAI 190  Aspergillus t...
Q2UDT9        143 AFEKLt-----------------WLPEFFGN---CS-------------CqdAFSAYNVHIYn------KT-VDEAITRI 182  Aspergillus o...
Q098D0        148 NYCGDCvseggttFTDPVa----YLDAFFAA---CT------------NC--KVDYVAVHWY-------ACdVSALSWYI 199  Stigmatella a...
Q880J1        182 NW---Gt-----mSGYGDpv--vWLDAFYAAyrsMNqn---------rDP--RIDYLAFHWY----------DYGLAGML 230  Pseudomonas s...
Q21GJ5        854 NFCGNCvten--gttYYDpi--dYFDDFFEV---CP------------DC--RVDALSIHAY-------MGgVGGIEWYI 905  Saccharophagu...
Q21KS2        206 NYSPGNvdipgtdDDYDPw---lYLDAFFEA---CE------------GC--QVDYIAVHCY-------MKyESAFSWYV 258  Saccharophagu...
Q5K893        313 CHQAA--------EEYTK-----WLSTFSTQ---IS-------------T--SWDITNLHINk------NS-MDGVKEDI 354  Cryptococcus ...
WP_020459583  262 AAGAADpn--------------sWFGQFMAG---AAq----------rGY--KVDFIALHWYgsdfdptRA-TGQLRAYI 311  Frankia sp. E...
XP_011394129  865 GIFENAFPgLDIWITEFG--------IPSETLEN----TQKFYNQSIPYLDSKESVKRYAWFGaf--rSIVSNVGPNQAF 930  Neurospora cr...
Q54TQ9        177 NSLYQLTK-KPVWLTEFAc-------NSPASKES----VVTFAQALLPRLENSTQVGRYSWFI-----PYCGGCGAGDLL 239  Dictyostelium...
Q0CZT6        191 NTFHSKYNdKPLWITEIApr----qpNCDAPTSSvwakSTEFMNEIFAWGQQTEWIEKIFWNSgnqivLHCDTNVAASYL 266  Aspergillus t...
Q2UDT9        183 NAFHQKWNdKPLWITEIApg----qyTGACPNPVpwnhTTEFMRDIFAWGERTEWIHKIFWNSan-eiSCGDTNVAASFL 257  Aspergillus o...
Q098D0        200 GLF-KKYN-KPIWLTEFAc-------GDRPHNEItlavQKKYMTDAVNYLENEPAVFRYSWFS------GRNSEIPNINL 264  Stigmatella a...
Q880J1        231 DRL-SRYG-KPVWVTEFAnw----hgLDDGMQIDsvekQKQQMANMVATLEGRADVFRYAWFT-----GRMTQDPHFSSL 299  Pseudomonas s...
Q21GJ5        906 DLF-AKYN-LPIWMTEFSa------wDDTTTEEE----QIFFMTQAVDYMEQHENVERYAWFT------GRRNGHPYNGL 967  Saccharophagu...
Q21KS2        259 GEF-ERYN-KPIWVTEWAgw----ddGGPANMGE----QMNFLSDTVRWMESNDNIYRYSWFLgr--sSEGYDQFPYLDV 326  Saccharophagu...
Q5K893        355 DYYYNTYG-KPIWVTEFAcvddstdfVPCTDQSE----INTFINDIVALFESDDRVQAYAYST-------GEGLSSEWDM 422  Cryptococcus ...
WP_020459583  312 QDVYDRYH-LPIWLTEYSlmnfstspATVPSAEG----QAAFVTASTAMLESLPFVERYAWFA------FPANPDSRTGL 380  Frankia sp. E...
XP_011394129  931 LDAY------G-QLTDIGSWY 944  Neurospora crassa OR74A
Q54TQ9        240 YSSLyndqsgNkNLTPIGQYY 260  Dictyostelium discoideum AX4
Q0CZT6        267 IDGN------G-NPTPLLAPF 280  Aspergillus terreus NIH2624
Q2UDT9        258 LDFN------D-NPTPLLDPF 271  Aspergillus oryzae
Q098D0        265 LGNS------G-QLTELGQLY 278  Stigmatella aurantiaca DW4/3-1
Q880J1        300 LSNE------G-TLTELGQYY 313  Pseudomonas syringae pv. tomato
Q21GJ5        968 FDYRq----sG-VLTELGSAY 983  Saccharophagus degradans 2-40
Q21KS2        327 LLAD------G-ELTPLGSVY 340  Saccharophagus degradans 2-40
Q5K893        423 VSN-------G-ALTESGQTY 435  Cryptococcus neoformans
WP_020459583  381 YDES------G-QPTPAGVAY 394  Frankia sp. EAN1pec
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap