5N5Y


Conserved Protein Domain Family
zf-RRN7

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pfam11781: zf-RRN7 
Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
This is the zinc-finger at the start of transcription-binding factor that associates strongly with both Rrn6 and Rrn7 to form a complex which itself binds the TATA-binding protein and is required for transcription by the core domain of the RNA PolI promoter.
Statistics
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PSSM-Id: 403092
View PSSM: pfam11781
Aligned: 76 rows
Threshold Bit Score: 31.8065
Threshold Setting Gi: 340553242
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5N5Y_Q              4 FIRGPICGTDNCps-rLWRI-IDGRRTCQYGHVMEG 37  
XP_028028136        1 MNSHNSCEVCGNk---DMAL-IDGFYYCVECGTQDT 32   wild silkworm
XP_002423409        1 ---MLKCDVCKNe---SFEK-FDGYMYCTECHTQSQ 29   human body louse
XP_002603814        1 ---MPRCPICDGe---NFEE-IDGRYYCDECHTESQ 29   Florida lancelet
XP_011437370        1 ---MPVCETCEGe---DYEE-IDGFFYCTTCQTQSQ 29   Pacific oyster
KJE93978            1 ----MLCAVCENe---TFVEdEDGFFVCDACGTQSQ 29   Capsaspora owczarzaki ATCC 30864
XP_003060298        1 --MVLVCVVCRGe---AFDEtNEGFYVCLRCGTQSQ 31   Micromonas pusilla CCMP1545
jgi:MICPUN_62712    3 DLRGVACVACGSe---TFEEtDAGFYVCARCGTQSQ 35   Micromonas commoda
jgi:OSTLU_27617     6 ARDEIACATCRArgaaSFAPsDAGFYVCVRCGTQSQ 41   Ostreococcus lucimarinus CCE9901
XP_313802           2 TEPNDICEVCGLg---DFIL-EDGFYYCTECGTKLL 33   Anopheles gambiae str. PEST
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