4BLP,4BLR,5MUW


Conserved Protein Domain Family
NTPase_P4

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pfam11602: NTPase_P4 
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ATPase P4 of dsRNA bacteriophage phi-12
P4 is a packaging motor which is involved in the packaging of phi-12 genome into preformed capsids using ATP. P4 is located at the vertices of the icosahedral capsid. ATP drives RNA translocation through cooperative conformational changes.
Statistics
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PSSM-Id: 402961
View PSSM: pfam11602
Aligned: 3 rows
Threshold Bit Score: 407.835
Threshold Setting Gi: 532137673
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4BLP_C  21 DKPADAKPAAVPKVAAPAVVEGSSTNA-----AAVKK-SLRDGGMtalpseiLFAVGSI---PLVVDKDALSTLAAALVA 91  Pseudomonas phage phi13
4BLR_A   2 IHLYDAKSFAKLRAAQYAAFHTDAPGSwfdhtSGVLE-SVEDGTP-------VLAIGVEsgdAIVFDKNAQRIVAYKEKS 73  Pseudomonas phage phi12
5MUW_I  17 ADLLDASPVSLQVLGRPTAINTVVIKTy---iAAVMElASKQGGS-------LAGVDIR---PSVLLKDTAIFTKPKAKS 83  Pseudomonas virus phi6
4BLP_C  92 SDDPSTwfvanrelirAVVFVPQQNNVLR----------ATPLLSVRPVASLSSVHNWQvrnhlSGLHVVVGGTGAGKS- 160 Pseudomonas phage phi13
4BLR_A  74 VKAEDG----------SVSVVQVENGFMKqghrgwlvdlTGELVGCSPVVAEFGGHRYA-----SGMVIVTGKGNSGKTp 138 Pseudomonas phage phi12
5MUW_I  84 ADVESD--------------VDVLDTGIY----------SVPGLARKPVT-----HRWPsegiySGVTALMGATGSGKS- 133 Pseudomonas virus phi6
4BLP_C 161 ------KWLNAQ-TPDVTIRWGEPGETFDMeESSIAVADLTEmlavalllATADYRV-VIDSFRNLVFGITGAAGPGGVS 232 Pseudomonas phage phi13
4BLR_A 139 lvhalgEALGGK-DKYATVRFGEPLSGYNT-DFNVFVDDIAR--------AMLQHRViVIDSLKNVIGAAGGNTTSGGIS 208 Pseudomonas phage phi12
5MUW_I 134 ------ITLNEKlRPDVLIRWGEVAEAYDElDTAVHISTLDEmlivciglGALGFNV-AVDSVRPLLFRLKGAASAGGIV 206 Pseudomonas virus phi6
4BLP_C 233 VALYAALTSLNNICAELGVLLVAAINPMSSDDK-VSLVYNNIAASVAGMTVVNNAAVVSQTI-RSGTGrifs-gepAPRN 309 Pseudomonas phage phi13
4BLR_A 209 RGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKiVELVKEASRSNSTSLVISTDVDGEWQVLtRTGEG--------LQRL 280 Pseudomonas phage phi12
5MUW_I 207 AVFYSLLTDISNLFTQYDCSVVMVVNPMVDAEK-IEYVFGQVMASTVGAILCADGN-VSRTMfRTNKGrifngaapLAAD 284 Pseudomonas virus phi6
4BLP_C 310 DSPVEYHEPRHTQLDEPSGPSARIRLESN----NIDPDDENDNRPRRGA 354 Pseudomonas phage phi13
4BLR_A 281 THTLQTSYGEHSVLTIHTSKQSGGKQASGkaiqTVIKNDELESVLRRLT 329 Pseudomonas phage phi12
5MUW_I 285 THMPSMDRPTSMKALDHTSIASVAP------------------------ 309 Pseudomonas virus phi6
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