Conserved Protein Domain Family
DUF3179

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pfam11376: DUF3179 
Protein of unknown function (DUF3179)
This family of proteins has no known function.
Statistics
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PSSM-Id: 402814
View PSSM: pfam11376
Aligned: 45 rows
Threshold Bit Score: 232.608
Threshold Setting Gi: 119768360
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Hbor_23540        23 PDAIPSV------DnpTFGPADEYDG------DGSDDVIVVEIAGD-ARAYPVRFLHYHEIVN-DEFGSVPVAVTWCPLC 88  Halogeo...
Q28P67               189 CNCIPAI------DnpRVETAAEATWl-----DDDDIVFGIVLNGE-ARAYPRRIMEVREMVN-DTLGGRDLGIPYCTLC 255 Jannasc...
Q5LR97                57 KDGIPAL------SdpAFVSAATAEDl-----EGREPVITVALPGEvARAYPLRYLMWHEIVN-DQIGTVPVAVTFCPLC 124 Ruegeri...
goetting:PGA1_c17500  66 KDGIPAL------SdpAFHPAAQVKGl-----SPAEPVVVLDLPGQvARAYPLRYLIWHEIVN-DRVGGTPVAITYCPLC 133 Phaeoba...
jgi:Dshi_2152         52 KDGIPAL------SdpEFIPVIEEDRi-----DPREPVIAVELGGQtPRAYPIRYLTWHEIVN-DTVGKLPIAVTFCPLC 119 Dinoros...
WP_024266845          68 KDGIPAI------DspEFSRLEENSPg----lTDNEMVIAVSMEGV-HKIYPLRILIWHEIVN-DTIAGTPIAVTWCPLC 135 Salinis...
Q6LG32               101 gminPHImmrarmDngVFVSVEQATKy----yAPNESVIVLEINGK-ARAHSDKQLLRPHVVGnGELGGENVVMTYCGLT 175 Photoba...
jgi:Sama_2728         97 gminPHImmrermDngVFVSVETARKy----yAPDESVIVLDINGA-ARAHSDKQLLRPHVAGnGELGGENVVMTYCGLT 171 Shewane...
jgi:Runsl_0567        97 mfyqPSV------LslKNAVENKVDK--------ERLVIGVEVNGQ-ARAYPIQYIGYHHQVR-DTLGGKPIIVTYCTVC 160 Runella...
WP_013454448          90 ekaFPAV------FfpAMAK-----DpnqlplDDQMEMAVIEYEGI-TKCYPLDYVIHHHIIN-DHFEDKIVALTYCAMC 156 Marivir...
jgi:Hbor_23540        89 GSAVVYDR-RVAeaapadddadvpdhaVLELGVSGKLADDDLVMYDRETGSEWKQSSGACLSGVHEG--MRLAVLPAATT 165 Halogeo...
Q28P67               256 GAAQAYFTdELPdg-----------vdRPILRTSGLLIRSNKVMYDITTWSVFDTFTGRAVTGPLLErgIQLEQASVITT 324 Jannasc...
Q5LR97               125 NSGLTFDR-RSPa-------------gELEFGVTGKLRNSDMVMYDRQTQSWWQQAQGLAIVGRLTG--TELQTLPSWME 188 Ruegeri...
goetting:PGA1_c17500 134 NSAMNFDR-RVAg-------------rTLSFGVTGKLRQSDMVMYDRESESWWQQATGTGIVGEMTG--RELRQLPSWLD 197 Phaeoba...
jgi:Dshi_2152        120 NSAITFDR-RLEd-------------tVITLGVSGKLRMSDMVMYDRETESWWQQAVGEGIVGVHTG--KVLEQLPTWME 183 Dinoros...
WP_024266845         136 NSALVFNR-RISheg---------rslVLDFGTTGRLRYSNLLMYDRQTETWWQQGSGRALIGKHTG--TQLEILPSTVM 203 Salinis...
Q6LG32               176 NLGMAYTP-EINg-------------qKLDLAPMNQL-ENNLVMYDKNSGEPIQQLWGQKEADRNNSvdAKMREWPTYRM 240 Photoba...
jgi:Sama_2728        172 NLGMAYTP-EIDg-------------kALQLAPMNQL-ENNLVMWDKVSGEPIQQLWGQKEADINQGgsAKMREWPTFRM 236 Shewane...
jgi:Runsl_0567       161 RTGRVFEP-IVNg-------------qPETFRLVG-MNHFNAMFEDKTTGSWWRQANGEAIVGKLKG--QTLPELDITQI 223 Runella...
WP_013454448         157 RSIIPFDVtAIGpl------------------kVGSFKNANMIVADVRTNTFFQQSTFQSLIGKLHP--YELTMIPFQIL 216 Marivir...
jgi:Hbor_23540       166 TAEAFARDYDDGAML-------RPPGGESEaasdsdepasiEYDADPYEAYFeMpgyglgahrgtggRDDWpQSLSTAg- 237 Halogeo...
Q28P67               325 EWGAWREAHPDTTVL-------VEALALGR-----------DFDFrn-------------------tRDANgPIFPVGdv 367 Jannasc...
Q5LR97               189 SWDQFRARAPQGLVM--------AEPAFRR-----------AYGRNPYVNYD---------------SARR--PFLYDge 232 Ruegeri...
goetting:PGA1_c17500 198 SWQGFQAAYPLGLVM--------AEPRHNR-----------SYGRNPYQGYD---------------RSNW--PFLYDga 241 Phaeoba...
jgi:Dshi_2152        184 SWAEFSSRNPDGLVM--------EEPSWSR-----------DYGRNPYVNYD---------------SSRR--PFLYSge 227 Dinoros...
WP_024266845         204 SFKNASRVYSGGMVL-------KSPEDSAR-----------AYGMNPYRGYE---------------DSSM--PLLYNgp 248 Salinis...
Q6LG32               241 PFEKFAKAFPEGEVFvndylveDMKASFWE---------------NPFLAIYdPimelifdhaivdqATSVdPTFPTIkh 305 Photoba...
jgi:Sama_2728        237 PFSKFAEAYPNGEVFlndylvqDMKPSFWE---------------NPFLAIYdPimeaifdhaivdqATNEdPTFPTIqh 301 Shewane...
jgi:Runsl_0567       224 SLEKWLTLHPNSLVM-------QPDTKFQE-----------EY--DSLSNYE---------------SGKR------Kge 262 Runella...
WP_013454448         217 SWLEVKQTIESPQVV-------KVSEKDFK-----------DFEL-PIPGIWkKl-----------vASEAtPGLASKnr 266 Marivir...
jgi:Hbor_23540       238 --------VEPKSIVAGL--ERDEDALGIPLEVA----EAtgGVVRVTVGDDE----AVVFATADGIHAFEAPSF----- 294 Halogeo...
Q28P67               368 d-----prLAVQEDVIGVi-TASGQPVAFPRATAllalRS---------GAEVavenIRLELDAGGIRAVDA-------- 424 Jannasc...
Q5LR97               233 ap---phgIPALARVVRV------GARAWPLTRLa---AA--GALEEAG--------LRFEWREGQASALDTARIgdgre 290 Ruegeri...
goetting:PGA1_c17500 242 pp---phgIAPLARVVRV------GDRAWPLARLa---KV--GEIREAG--------VILSWRAGQASALDAGHVgkgrd 299 Phaeoba...
jgi:Dshi_2152        228 mp---phgIPALARVIRV------GDRAWPMERLr---LT--EELTEDG--------VTISWRAGKASALDTSRIgdgkd 285 Dinoros...
WP_024266845         249 dfp-gdqpPMLDRAVVVH--NAGENPVTIGYARLr---AE--PFMELNSADNT----VYLIYDPDARSPLDRGRVntgrq 316 Salinis...
Q6LG32               306 i----dtrLPNKELVYGL--NIGDDYVAYTVDFVk---SHd-KPINATVGGKE----IVV-------------------- 351 Photoba...
jgi:Sama_2728        302 k----dprLPNKTLVWGL--NVGTDYVAYTEDFVr---QHa-QPINTEVGGKN----LVI-------------------- 347 Shewane...
jgi:Runsl_0567       263 ltkrdstsWKEKSWVVGV--EVSSGVKAYDWNQLq---KK--RIINDMIGYLP----VTVVLASDNKSFAALRRAtpgqk 331 Runella...
WP_013454448         267 d-----ktFPARTHVIGItdSSIKDRLVYLKKEVl---SE--KVVENKE--------YGFVLIGAGKTVNAYKNTlkaqk 328 Marivir...
jgi:Hbor_23540       295 ---------------------------------------------------ELEPTDeegmfvgdGTTWHGg-------- 315 Halogeo...
Q28P67                   --------------------------------------------------------------------------------     Jannasc...
Q5LR97               291 ----------------------------------------------vgsirVRDGQG----------------------- 301 Ruegeri...
goetting:PGA1_c17500 300 ----------------------------------------------vgsvrVQGRNG----------------------- 310 Phaeoba...
jgi:Dshi_2152        286 ----------------------------------------------vgsirVRDAEG----------------------- 296 Dinoros...
WP_024266845         317 vgtanafldkttegrkvdlqlltlnaldsatdsegissdqlqeyalndgrlIFDRLS--------STIFDAn-------- 380 Salinis...
Q6LG32               352 ---------------------------------------------------SYDYEF--------ESLGIFynttgetlt 372 Photoba...
jgi:Sama_2728        348 ---------------------------------------------------AWDNEY--------QSLGIYynphqepvv 368 Shewane...
jgi:Runsl_0567       332 l--------------------------------------------virndsLYDEGG--------CVYTLL--------- 350 Runella...
WP_013454448         329 la------------------------------------------irldgneLRDANS--------NTKWNIr-------- 350 Marivir...
jgi:Hbor_23540       316 ----tGRADDGR----TLDRLPVRRLFAFAWrddhgrDAF 347 Halogeometricum borinquense DSM 11551
Q28P67               425 ----------------DGTDLGSHQAFWFAW------SQF 442 Jannaschia sp. CCS1
Q5LR97               302 ------------------RDIAHDVMFAFAF------HAF 317 Ruegeria pomeroyi
goetting:PGA1_c17500 311 ------------------ADLPHDVMFAFAY------HAF 326 Phaeobacter inhibens DSM 17395
jgi:Dshi_2152        297 ------------------NDLPHDVMFAFAY------HAF 312 Dinoroseobacter shibae DFL 12 = DSM 16493
WP_024266845         381 -----GLGVMGPltgsRLSPGVSVQHFWFSA------TIF 409 Salinispira pacifica
Q6LG32               373 eidfyGQTPYGKl--pRVETV-KAAAYWIIW------ANF 403 Photobacterium profundum
jgi:Sama_2728        369 eidffGHSNVGKl--nRVETV-KAGAYWIIW------ANF 399 Shewanella amazonensis SB2B
jgi:Runsl_0567       351 -----GKSHKPGi--pDLVKVSAYQEYWHSW------QTF 377 Runella slithyformis DSM 19594
WP_013454448         351 -----GKYISGElk-aDLEPIAISDEYWFSW------IKF 378 Marivirga tractuosa
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