Conserved Protein Domain Family
Rhamno_transf

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pfam11316: Rhamno_transf 
Putative rhamnosyl transferase
Most members of this family are uncharacterized, but one is a putative side-chain-rhamnosyl transferase.
Statistics
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PSSM-Id: 371463
View PSSM: pfam11316
Aligned: 11 rows
Threshold Bit Score: 251.526
Threshold Setting Gi: 500013227
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q28UX3          6 KIIGVCRFSYLG----LGgfrin----eagaeEAAKALYAADRMTLRFAYFETICLPSLAAQTDSDFTFVALIADTMPLP 77  Jannaschia sp....
WP_011693945    6 DHVLLTRFNLPS----RG--------------AESRIRAKDGWLKTRLGLFESYCLPSVRCQSNQNFHWIIYFDPQSPAW 67  Arthrobacter s...
Q15U76          3 QHFIITRFNLRKvdwtLS--------------KTNAPVLTDTWMSNRLALFENYCFSSLTAQTQQNFTWLVFFDVTTPDK 68  Pseudoalteromo...
WP_011750265    4 EIVGICRFSFLGrcdwAGtaaqggd-iadlmaRRRAMLYAPERLERRFAAFEALCLPSVRAQTDPDFRFWLLTSPEMPRP 82  Paracoccus den...
jgi:Pden_2007   8 NIVGVCRFSMLGrgdwKAyrnqpeealeeiyaEKVKELFEPRRIEARLATFQHLTLRSLTHQTDPNFSFLVVSSDRMPEK 87  Paracoccus den...
Q1GK47          6 KMVGVIRFSLLT----PTfnadr----ypdleAAAAAIFAPDRMALRLHLFETLCLPSLVRQSDAAFHLVVATSDRLPAV 77  Ruegeria sp. T...
Q5LMR0          2 QVLGLCRFSYLG----LGgfkvm----hetleERRAYLYAPARMEDRFRQFEAVTLPSVTGQTDPDFEFLVVIGECFPDS 73  Ruegeria pomeroyi
Q5LMR1          7 QAIGLCRFSYPA----IGgfqve----hetieERISYLYAEDRLEERFQLLETVALPCLREQTDQNFELIVVIGDTLPKR 78  Ruegeria pomeroyi
Q1GK45         28 QVIGLCRFSYPA----IGgfqie----hqshaERIAFLYDDARLQERFRLFETVALPSLRAQTDQDFDLVIVIGSCLPAR 99  Ruegeria sp. T...
jgi:Pden_0752   4 QMLGLCRFSYLG-----Grgfqvm---hetlaERRAFLYDPERLARRWFWFENVTLPGLLAQTDPDFTLVLMTGPDLPEP 75  Paracoccus den...
Q28UX1          6 QVQGLCRFSFPC----TGgfkky----hesleERRTALYAPKRLDERTLWFEHIFLPPLHAQTDDDFSLHLLLGEDLPDP 77  Jannaschia sp....
Q28UX3         78 FRQRLKRLTETYPfLRIAVLESTG-PYNSTRRAfsRGLDGQETDFITGFRLDDDDAVSVDYIARTREAAdtlitlgwaTK 156 Jannaschia sp....
WP_011693945   68 LRERIAELNQDAL-FTPIFRAEVS-SAELLQDL--HAVTGARHNELLTTNLDNDDGLASDFVERLQAAG---------HS 134 Arthrobacter s...
Q15U76         69 FRREIARLEQIFPqFTPVFIDGMD-AFQSQIRV--QIKQRLRQPYVITSRLDNDDSLHQDYVREVQSHf---------AQ 136 Pseudoalteromo...
WP_011750265   83 WLDRLRDLCAGLAqIRLIVSDKRE-TVNALREPl-REAAEAAGRPVIQFRVDDDDAFSCHHVARIRRHArr------fSD 154 Paracoccus den...
jgi:Pden_2007  88 YRRQLADICAADKrVILKFVPPMH-ISDAIRMV--AEEQDWSLPNSVQFRLDDDDCVSKEYIRRLRRHAsg------mWR 158 Paracoccus den...
Q1GK47         78 ILQHLQALLAPHDhMQLIQFAPEN-HYQILKEAy-RAVPQQGESHRILFRLDDDDALDRHYVARCKRLAaglv-plqtEA 154 Ruegeria sp. T...
Q5LMR0         74 YRARLEDLVRGVPqVRIRAYPPLR-HRTAMAQAl-DDHRRDMDAPCLQFRLDDDDGMARDFVARYREVAadte--alwRK 149 Ruegeria pomeroyi
Q5LMR1         79 HGDRLHDLTSDMPqVRIVVEPPRP-QRELMKELl-NSARTDPSKPCLQFRYDDDDAVSVDFIERFRNALndcr--glvTT 154 Ruegeria pomeroyi
Q1GK45        100 HEARLRDLISGMPqARIEQHPPRR-QREIMKDVl-NRARRDPTAPCLQFRFDDDDAVSVDFVERLRSTIadcp--glvAR 175 Ruegeria sp. T...
jgi:Pden_0752  76 WLSRLRELAGIMPqARLELVPPMEkHLDACMAAi-APHIEPDADVVGHFRQDDDDAVAIDYIRDARTDFaamr--plwER 152 Paracoccus den...
Q28UX1         78 WRSRVETAIKDIPqITPHWRAPGD-HRAICRDVm-WGGRDGSRATVAEFRLDDDDAVAVDYVQQLRRAWgkls--rltNT 153 Jannaschia sp....
Q28UX3        157 DDPAAVCFHRGIYWdmkrpdaP-FWDYSEIQPLGLASAMVHHRDSRQNIYRWNHRKLASKVR-CWTDPSDVMFLRTLHDH 234 Jannaschia sp....
WP_011693945  135 GTRTAIYLVNGLIR-------CgSGLYLRTDRANAFCSVREDWAAARTCWSDWHNLLGRSMS-VKELAGDPAWLQLVHDS 206 Arthrobacter s...
Q15U76        137 QSFMAIDIVDGYTLqv----ePqVCFAKRSHVHNPFISLIEKAGEIKTVWFLDRHGQWSDVKaLKSVRNKPMWMSVIHME 212 Pseudoalteromo...
WP_011750265  155 LPAFAISYPQGLVMgsy-egePiSYWRAHQPFLGAGAAVRMR-GPGRCIYAYNHFQLPRYFP-AFTDVDGLGYVQTRWDE 231 Paracoccus den...
jgi:Pden_2007 159 NGNFGISFSQQYYCitd--gpTeGIYDWYSPFFSAGAAVR---SAGRTIFDFGHYQIPLRMT-AVTDPHFPNIV-THRGD 231 Paracoccus den...
Q1GK47        155 VSPIALAFNRGYYLireegqpPvVMDSCERAPLSAGTALVQPIAARGNPYRYNHRKFAQHYT-LYSDISVPSFVRTVHGD 233 Ruegeria sp. T...
Q5LMR0        150 HPAVAVDFNTGYVFrcg--krGiEISPFQFAYSAIALGVIVAPGHREGIMHFGHHKLWTVMP-TITVPGEDMMLRGHNEF 226 Ruegeria pomeroyi
Q5LMR1        155 NRTVAVDFNRGYVAelg--adGiAATETVRTLYVASLGMYVKGGCRLTIMNFAHEKIGRFMP-VISISDVPMWVRSHNGF 231 Ruegeria pomeroyi
Q1GK45        176 HKSVAVDFNMGYVAefg--aeGiKAAEVHSPYNVAALGMYVRGGARVTIMNFAHHKILRFMP-TVTLSDAPMFVRGWHGS 252 Ruegeria sp. T...
jgi:Pden_0752 153 RRRLSCDYSRGLVLkvt--rdGvSVEQRVIHNASAGLTVYLPPDAQRSAVHFQHWKIGLSMP-GVTLAGKAMFVRSLNHD 229 Paracoccus den...
Q28UX1        154 HGRVALDHGKGMVLeaq-pdrSiTPHVLNTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVP-FVNLTDSVMFIRGDHAH 231 Jannaschia sp....
Q28UX3        235 NDSGRVMPRD 244 Jannaschia sp. CCS1
WP_011693945  207 NVSNRIRGRR 216 Arthrobacter sp. FB24
Q15U76        213 NKVNTFLGFD 222 Pseudoalteromonas atlantica T6c
WP_011750265  232 GDSVATIVAR 241 Paracoccus denitrificans
jgi:Pden_2007 232 NDTPRHAPEI 241 Paracoccus denitrificans PD1222
Q1GK47        234 NHSTPAMMGL 243 Ruegeria sp. TM1040
Q5LMR0        227 NDSRAKPGAK 236 Ruegeria pomeroyi
Q5LMR1        232 NDSRQKKVKP 241 Ruegeria pomeroyi
Q1GK45        253 NDSRQKPVKS 262 Ruegeria sp. TM1040
jgi:Pden_0752 230 NDSGAIGAGY 239 Paracoccus denitrificans PD1222
Q28UX1        232 NDAKTPFGAG 241 Jannaschia sp. CCS1
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