Conserved Protein Domain Family
DUF3068

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pfam11271: DUF3068 
Protein of unknown function (DUF3068)
Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.
Statistics
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PSSM-Id: 402729
View PSSM: pfam11271
Aligned: 82 rows
Threshold Bit Score: 145.874
Threshold Setting Gi: 256356480
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4JXZ1          5 LSSVAIVLGVAMLVFAIALPTYVVPKGKVLPLDLVSTTGTPKT-PGNLLDSGALAAgkpvgnnkdkpeckgdnpqvscfi 83  Corynebacteriu...
Q47M30          5 VATVGVAFGVFCLVLAPLLRYWVASAFMKTPLDYYAQTVNRSE-DATYFNVEEMKVi----------------------- 60  Thermobifida f...
IGS:B005_3135   5 VAVVLIALGVFCLVSAPMMRTWMSGSLMKTPLDYYNATVNTG--EVTYFNIEDLEQv----------------------- 59  Nocardiopsis a...
jgi:Ndas_0268   5 VAVVLVAFGVFFLAFAPMMRTWLSSSLMKTPLDYYSETVLEAD-GATYFNIEDVELv----------------------- 60  Nocardiopsis d...
jgi:Sros_1476   5 VGVVLLAVGAFLIVLAPLVRFQIGGSLIAAPAAQYGISKLTAE-GAQYFSARDLKV------------------------ 59  Streptosporang...
jgi:Tbis_0810   5 VGLVLLAIGAFLVVLAPLLRFPVAGRLVQAPSDQYNIIKLTAE-NAQYFSIADLKV------------------------ 59  Thermobispora ...
jgi:Sros_1473   7 rqvTLVAAGSFALILAALLRLYVYPHSALHPREPYPATVHLSAaGATYFDWATLRLr----------------------- 63  Streptosporang...
Q47M23         32 AGLLTTMLGAFCLTAALLLPLVVAPRLALLPAEFHYTWTLLDP-HATYLDTAHWQTr----------------------- 87  Thermobifida f...
WP_014910885   20 kGTLLVAAGAFLMTLALLLPLYVHDRVALIPGEFSQTLRMTAS-DAAYLDTATWQNh----------------------- 75  Nocardiopsis alba
jgi:Ndas_3705  26 rGTLLVAVGAFLLTLAALLPLYVYERMALLPAGAEFDIRMLDE-DAGYLDTSTWSWv----------------------- 81  Nocardiopsis d...
Q4JXZ1         84 nKDLEMQSQRFTTAQ-EPSDKEVVTLEAGQTLFRTDKEEPknlISASIDHVTLDRKTQMPVpdptssielnapaldaaan 162 Corynebacteriu...
Q47M30         61 -EGATVEAHTTLKADvRASDDDIVVWDEFRWVKDVDRDFA---FLSTTRHTAHDRVTGEAV------------------- 117 Thermobifida f...
IGS:B005_3135  60 -EDANVEAHSTLRADvASSTDDVVVWDQFTWIKDADTDFG---ISSTSRRAGHDRVTGEAV------------------- 116 Nocardiopsis a...
jgi:Ndas_0268  61 -EDAALEARSTIRADvASSTDETVVWDQFTWVRDAETDFG---ITSSSRRAGHDRVTGEAV------------------- 117 Nocardiopsis d...
jgi:Sros_1476  60 -MTGDLGITVTTRGDvSQAQGDRVVWDEVTSVNDVTNENPm--IALNERRSAFNKYTGEGV------------------- 117 Streptosporang...
jgi:Tbis_0810  60 -LNANLDVTVTVRGDvSQAKDDHVVWDQFQATNDVTNNRPg--IDFFEFRSAFNKYDGTGV------------------- 117 Thermobispora ...
jgi:Sros_1473  64 -VGEPVYRTAILQADpFAGDGDTAVWTELTTTNDRSGAR----IDYQERKVGFDRRTGVSR------------------- 119 Streptosporang...
Q47M23         88 -ENVEVKQTVSTRGTpVPGAPGLVAVATTIDTHGPLGA-----IGFLEYQRVVDRASGRIV------------------- 142 Thermobifida f...
WP_014910885   76 -ENVEVERATRVDASlHGA--DWSAWEMTVDTSVSDRI-----IDHWSRRVIVDRETGRAV------------------- 128 Nocardiopsis alba
jgi:Ndas_3705  82 -ESAELSRVTRVDASaHGG--DWSAWEVSVDTSVPDRM-----IDHWSRRVIVDRETGRAV------------------- 134 Nocardiopsis d...
Q4JXZ1        163 eGKDEEVEASVAPFTRPGITYQFPMGTDRKSYDYFDMQILKTQPIDYVGEEEQDG---EKVYRFEQTVPPTELYpalrer 239 Corynebacteriu...
Q47M30        118 --DCCGSSVNEESVPQSGQAFKWPFLVEQRDYEFFDSTVREALPIRFEGVEEVDGhpgVEAYKFVQEVEPTVVE------ 189 Thermobifida f...
IGS:B005_3135 117 --DCCDAMINEESVAQSGQAWKFPFMTEQRDYDFFETTVQEVVPMKFEGVEEIDG---VEAYKFVQTVEPTVID------ 185 Nocardiopsis a...
jgi:Ndas_0268 118 --DCCDSMVNDESVAQSGQAWKFPFFTEQRDYDFYETTAREVVPMEFQGIEEVGG---VEAYRFVQEVEDEVIG------ 186 Nocardiopsis d...
jgi:Sros_1476 118 --NCCAVNIDKKPSKLEGQIYKFPFDVEKTTYKVFNATAGMAFDAKFVGEENVNG---LTAYKFEQIAPSTKTE------ 186 Streptosporang...
jgi:Tbis_0810 118 --TCCGVNVNKTPVTIEGQVFLFPFGVEKKTYKVFNPVTKQAYDAEFAGEEVIEG---LDVYKFRVKVPPTVTE------ 186 Thermobispora ...
jgi:Sros_1473 120 -SCCEEYVGARRGVRQAGLAFRWPIDARPVAYPFFDPVTLRETRMRYTGEQTVRG---LRVHRYEQDTAPVRMEdvadp- 194 Streptosporang...
Q47M23        143 -DCCGTSGAGSGA--RTGL---WPPGTAEAAFAFHDPETHAAPVMRLDGIEDRDG---LTVHRYRQEIPPTRVPg----- 208 Thermobifida f...
WP_014910885  129 -NCCGEHVDGDRAVRQAGLVLNWPAGAPEDGHSFYDAEMRSAPSVGFDEEDEVGG---LAVRRYTQTVPPTQVPe----- 199 Nocardiopsis alba
jgi:Ndas_3705 135 -NCCGEHVDGDRAVRQAGLVYFWPPGDGEGEYPFYDAEVRSAPMLEFQEWEEVAG---VPVRRYSQWIESTQMPd----- 205 Nocardiopsis d...
Q4JXZ1        240 leadgelskgdkgtlaalRLKFPAKV--WgidpadikkkdgaqdekkdekadekkegeegkdsdkedlgpeVELSRYYTV 317 Corynebacteriu...
Q47M30        190 ------------------TRELPRSLlgld-------------------------------------gegdVTADIVYSN 214 Thermobifida f...
IGS:B005_3135 186 ------------------EREVPRSVagld-------------------------------------gegdVVGDETFSM 210 Nocardiopsis a...
jgi:Ndas_0268 187 ------------------ERTLPRSVagme-------------------------------------gegdVTGDEVFSI 211 Nocardiopsis d...
jgi:Sros_1476 187 ------------------TRTAPASImgvad------------------------------------ttgdVQVDRFYEG 212 Streptosporang...
jgi:Tbis_0810 187 ------------------TLTAPASVlgmd-------------------------------------epgdIQVSRVYEA 211 Thermobispora ...
jgi:Sros_1473 195 --------------lpgrILGLPGSA---------------------------------------------VRVARFAET 215 Streptosporang...
Q47M23        209 -----------------sVRDVPAAAlgLdrk-------------------------------------gtVRAERWVEA 234 Thermobifida f...
WP_014910885  200 -----------------sAREVPAFLfdGgar-------------------------------------gtVEATRWLEL 225 Nocardiopsis alba
jgi:Ndas_3705 206 -----------------sARPVPASLfrPgat-------------------------------------gtVTATRWLEV 231 Nocardiopsis d...
Q4JXZ1        318 HRVLRVQPDTGVIVNGSEEVFQYYAQDDEEAqqilenkeeeiknptRTAVYFPGAWDDESREAQMKKSSEGLEKMKLMGT 397 Corynebacteriu...
Q47M30        215 TRTYWVDPITGSPLDLREEQRRVAVVDGEER---------------LVMFDATMDFTDETVAERVAAAADG-DKIILIRT 278 Thermobifida f...
IGS:B005_3135 211 VRTYWIEPISGTPINISEDHHRVVVVDGEEV---------------LTLLSGELSFDDATRAASIENTEQARKVLPLLHS 275 Nocardiopsis a...
jgi:Ndas_0268 212 TRTYWIEPVTGSPLKIGEDQNRVVVVDGEEV---------------LTLFDAELVSNDESVQNAVANSEQGRTVLPLLQT 276 Nocardiopsis d...
jgi:Sros_1476 213 KNTYWIEPTTGSPVKQEQQRHDVLKTQDGAHs--------------IIAFAATAKMTPETVNELVENATEGKSQITMLKV 278 Streptosporang...
jgi:Tbis_0810 212 TITYWVDPITGLPVKQQQERREMLRTADGVDr--------------MPALIGTFTYTPETVRDLVSTARTNADQIRLITT 277 Thermobispora ...
jgi:Sros_1473 216 SRVYWVEPRSGLPIRVEEHIRQTLRTADDQEr--------------LVVLDATFRTAEQDVELFAAVAGDFAAWARAVET 281 Streptosporang...
Q47M23        235 VRVYWVEPSSGQVVDLAEQRRETLRALDSDHe--------------RLLLDADLEAVPSQVSRARHLADTQVRLLRAVQE 300 Thermobifida f...
WP_014910885  226 ERTFWVEPTTGAVVNMTEERSETLRPLNGSGk--------------VSLLEAELSLAEGQVASLVEGARVRSLLLRAVDL 291 Nocardiopsis alba
jgi:Ndas_3705 232 SRTFWVEPVSGIVVNAHETRAETLRPQNDSGe--------------APLLYARLVLAEQQVAAQAEQARVRSVLLRALSS 297 Nocardiopsis d...
Q4JXZ1        398 ILPWILGVVGLILLVVGW 415 Corynebacterium jeikeium K411
Q47M30        279 TLPIVLLAVGAVVLVIGL 296 Thermobifida fusca YX
IGS:B005_3135 276 TLPVAALIAGAGLIGIAV 293 Nocardiopsis alba ATCC BAA-2165
jgi:Ndas_0268 277 TLPVVCLVVGVGFIGVAV 294 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
jgi:Sros_1476 279 TIPLVLLLVGALLLVAGF 296 Streptosporangium roseum DSM 43021
jgi:Tbis_0810 278 TLPLSSLILGLIALVAGF 295 Thermobispora bispora DSM 43833
jgi:Sros_1473 282 TAPAVLAGLGAVMLAASA 299 Streptosporangium roseum DSM 43021
Q47M23        301 WGPLVLGVCGAVLVASGM 318 Thermobifida fusca YX
WP_014910885  292 WVPWAAGPLGALAILLGL 309 Nocardiopsis alba
jgi:Ndas_3705 298 WAPWTLAPLGGLVVLVGL 315 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
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