1Y96


Conserved Protein Domain Family
Gemin7

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pfam11095: Gemin7 
Gem-associated protein 7 (Gemin7)
Gemin7 is a novel component of the survival of motor neuron complex which functions in the assembly of spliceosomal small nuclear ribonucleoproteins. Gemin7 interacts with several Sm proteins of spliceosomal small nuclear ribonucleoproteins, especially SmE.
Statistics
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PSSM-Id: 402601
View PSSM: pfam11095
Aligned: 28 rows
Threshold Bit Score: 83.3874
Threshold Setting Gi: 144579532
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1Y96_B            8 QEQRARAALRERYLRSLLAMVG--HQVSFTLHEGVR--VAA-HFGATDLDVANFYVSQLQTPIGVQ-AEALLRCSDIISY 81 
1_pfamImport      1 EKQDARAFLRERFLRCISGFVG--TPCELTTLENSQ--LKA-EYNGMDIDGQDIFLKNLVTPMCNL-KFALVRTTDVINM 74 
OWR44012          9 lTQEARRQLRESFLRDVSELKG--QPCHILTYEQST--LEA-TFKGWKPDGSEVLVSNLKTPANIImSSALLRTPDILAI 83  Danaus plexi...
XP_002589141      2 QDQEDRSFLRERFLHLLKGIQG--NRTHCKMYEKTE--VDA-TFQLSDIDGQNFLVSNLETPMGTQ-PQAILRCADIISC 75  Florida lanc...
XP_007872236     14 NSQEIAFLQRMRTLKFYKFVSRsyKPVTFYLWNKAH--LKAsSFLGTDALETKFLVENLQTDWGIH-KQAVIRSGDIIWI 90  Pneumocystis...
jgi:OSTLU_32978  21 alaaCRVFLKLRALAVWDDLVG--RECDITLVGDREpcANA-RFAGVDARERAFAMEALRGALGTH-ARARVRCEDVVSL 96  Ostreococcus...
3_pfamImport      1 EQQRRRAIMREEYLRFLESAPG--KKATIYMYENTI--VTA-TILAFQPNSEHVIVENLATPIGIV-EKAVLRATDIVKI 74 
NP_001122676     11 EQQRRQAVLRERYLSFLQKSAD--KPATIEMCERTT--VTA-TIKAFQPSSEHVIVEKLATPIGIL-DKAALRSTDIVKI 84  Caenorhabdit...
EGT34791          9 EEQRRRAVLRERYLIFLQKAAH--KSAIIGTCENTK--LTA-TIKSFQLSSEHVIVENLATPIGNI-PKAVLRSTDIVKI 82  Caenorhabdit...
EKC24614          6 VKQEQRTVLRERFLRMCAAITG--QSANICMQEKTN--VQC-ILGHIDIDVQHVQVKDLLTPMGKI-PHAVLRLNDVISI 79  Pacific oyster
1Y96_B           82 TF 83 
1_pfamImport        --    
OWR44012         84 HF 85  Danaus plexippus plexippus
XP_002589141     76 SV 77  Florida lancelet
XP_007872236     91 KF 92  Pneumocystis murina B123
jgi:OSTLU_32978  97 SM 98  Ostreococcus lucimarinus CCE9901
3_pfamImport     75 SF 76 
NP_001122676     85 TF 86  Caenorhabditis elegans
EGT34791         83 QI 84  Caenorhabditis brenneri
EKC24614         80 QI 81  Pacific oyster
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