3JSR,3HZE,5M2U


Conserved Protein Domain Family
Ycf54

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pfam10674: Ycf54 
Click on image for an interactive view with Cn3D
Protein of unknown function (DUF2488)
This protein is conserved in the green lineage and located in the chloroplast.
Statistics
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PSSM-Id: 402351
View PSSM: pfam10674
Aligned: 36 rows
Threshold Bit Score: 101.529
Threshold Setting Gi: 427345373
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JSR_A         5 TYYYVLASRRFLLQe---EPIEEVLKERTRHYHEQEKEIDFWLVPQPAFLEA-PEFADIKAKCPQP------AAAIISTN 74  Nostoc sp. PCC ...
EDQ56958      82 VFYFAVANAQSLMLe--gPPLESVLQHGIERAERAKRARDVWLILEPAFLSEhPGLKTLNAQLTKP------TAAILSTN 153 Physcomitrella ...
CAV31262      60 NYHFIIGSSTFLLKn---EPLEEMLRERAQFFKREGKPITFWLVKSPEFLNS-NQLSGIQDKLLKAglsnveLTAIVSVD 135 Ectocarpus sili...
XP_002988203   2 QYHFLLANAKFMLDe--eEHLQELLRERLRNYDERNKEQDFWLVIEPKFVEK---FPEMSARLNRP------AVALVSTD 70  Selaginella moe...
EER94919      78 TYYFLVANAKFMLDe--eEHFQEQLAEKLRNYGERDKEQDFWLVVEPKFLDR---FPDITKRLKRP------AVALVSTD 146 sorghum
XP_009402417  79 RYHFVVANAKFMLDe--eEHFKELLYERRRNFEERNREQDFWLVVEPKFLDR---FPGIVKRLNRP------AVALVSTD 147 wild Malaysian ...
XP_010650790  91 KYYFVVANAKFMLDe--eEHFKELLFERLRYYGERSKEQDFWLVIEPKFLDK---FPNITKRLRRP------AVALVSTN 159 wine grape
XP_001691121  74 EYYALVCNAEWFFMdpqnESVAEQLREKVRFFKEQNKERDFFIVPNPKWLDA--KFPEQAKQVKRP------CVALVSTD 145 Chlamydomonas r...
XP_003056843  16 KYYFCLANADFMLNdennEHFPEVLRERRRFYRETNKDQDFWVVPNPAFLDA---MPDVAKKVRQP------CVAVVTTD 86  Micromonas pusi...
CAK28457      18 TYYFVAASAAFLTEe---EPLEEVLRERVRDYSEKGKEIDFWLVRQPAFLHA-PEFKEQASSIPQP------AAAVISTD 87  Synechococcus s...
3JSR_A        75 SQFI-TWLKLRLEYVVTGEFSA 95  Nostoc sp. PCC 7120 = FACHB-418
EDQ56958     154 ADWMlSYVKKSLPMAVMGKFTS 175 Physcomitrella patens
CAV31262     136 QSFI-TWLKLRLQNVAQGNFIa 156 Ectocarpus siliculosus
XP_002988203  71 PVWI-TFMKLRIDRVLKGVIEA 91  Selaginella moellendorffii
EER94919     147 GNWI-TFMKLRLDRVLQDQFDS 167 sorghum
XP_009402417 148 GPWM-TFMKLRLDRVLAESFEA 168 wild Malaysian banana
XP_010650790 160 GPWI-TFMKLRLDRVLSESYEA 180 wine grape
XP_001691121 146 KMWI-TFMKLRLDRVLKIDlks 166 Chlamydomonas reinhardtii
XP_003056843  87 EVWN-NFVKLRLDRVYKGCVEg 107 Micromonas pusilla CCMP1545
CAK28457      88 AVFI-DFMKLRLEYVLKGSFEA 108 Synechococcus sp. RCC307
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