4DIV


Conserved Protein Domain Family
DUF2479

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pfam10651: DUF2479 
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Domain of unknown function (DUF2479)
This domain is found in phage from a number of different bacteria. It is purported to be a putative long tail fibre (Bacteriophage A118) protein, but this could not be confirmed.
Statistics
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PSSM-Id: 371181
View PSSM: pfam10651
Aligned: 24 rows
Threshold Bit Score: 87.3878
Threshold Setting Gi: 524245344
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DIV_A           4 H-FITLSTTEPNnn------------------iGIVKLRHADVNSQAIVAQI-VENGQPKNF--EGLQPFFCLMAQ---- 57 
Q9CFT4           9 Q-TITWDMINQAf-------------------eQPIQIMEGDVNARTLLLKI-TDNGSVLDL--TGYSVKLTYQYMy--- 62  Lactococcus l...
jgi:Clopa_2781   6 Y-NITLDLKGNNsk------------------iEQIRATVGDSKSIQLNISV-IVDTIPFDL--TDHTAKITFTKA---- 59  Clostridium p...
WP_015613966     5 Y-NATFDLKGNNsk------------------iDNIKCTVGDTNAYQLNVSI-IIDKDAANL--TGHTAKITFTKA---- 58  Clostridium p...
WP_015615132     5 Y-NATLDLKGNNsk------------------iEPIRATVGDSKSIQLNINV-VIDTTPADL--TGHTAKITFTKS---- 58  Clostridium p...
Q2FX74           5 K-DVETRIKNDGvdl----------------gdIGCRFYTEDENTASIRIGI-NDKQGRIDLkaHGLTPRLHLFME---- 62  Staphylococcu...
WP_011101127     3 NqELVYDITKQPnlq---------------paqQAIYARVGDGGLKTVTVKL-NANNYPYDL--TGKHVNFEGVKA---- 60  Lactobacillus...
BAK21829         3 Y-DLYFDLNKNQteq---------------psqQLITARVGDGGLRAITVKV-TENGIDKNI--SGMTPVFEGLTA---- 59  Melissococcus...
WP_011475959     3 Q-ILKYVIGKDYrpltaleakggntftpdydksNWVQARQYEDSLRQVFVEItNEDGSAYDL--TGANVLFEGILPdneh 79  Lactobacillus...
Q03G10           3 M-YLKFRIGKDKrklvpingfe--lkdadsnnpQWLQGRQNEDGGRQVFVDLeDENGSPVNL--TGASAVFKGVLPggqy 77  Pediococcus p...
4DIV_A          58 -EATGQGVSEESvvsfDAKNGTLKYVASDNaLQFVGRNE-AYFSFRK-QEGgrwiEQFSTRTFHYIVEKSI-YSQPF--K 131
Q9CFT4          63 kSQSGFIMLTPN----DISKGEFTLIIPTE-MTVSGLIK-SNLILLNeSLE----QVIVSKNLTFISDDST-VTDLAreV 131 Lactococcus l...
jgi:Clopa_2781  60 ---DDTDVVDDLvidgDPVNGKLSYIVKNQaFSYPGQIK-TEIEIFD-AID----GRISSNSFCFTARTGQlEGTTI--V 128 Clostridium p...
WP_015613966    59 ---DKTKVFDDMii-dDAVNGKMYVIFKSQvIAFAGRVD-ADIEIYD-SSN----GRLTTGSFAFMVGTGQlDDTAI--V 126 Clostridium p...
WP_015615132    59 ---DDTTVFDNLii-dDAINGKMHVVISNQaFAAVGQVN-AEIEIFD-ATD----GRLSSNAFAFTARKGElNDGTI--I 126 Clostridium p...
Q2FX74          63 ---DGSIFKNEPliidDVVKGFLTYKIPKKvIKHAGYVR-CKLFLEK--EE----EKIHVANFSFNIVDSG-IESAV--- 128 Staphylococcu...
WP_011101127    61 --DSTRIIDTSGgivlDPQGGIFRYVFPAQtFTARGRFQqAFFKVML--GD----KVDTTIDVVVDVSPNL-VEFGI--N 129 Lactobacillus...
BAK21829        60 --DGHHIIDKGNslvlDPQSGVFRYIPPEEvFAVKGNYQqAFFKLMR--GD----QTDSTLEFTINVMDNK-VEFGI--N 128 Melissococcus...
WP_011475959    80 kILDNS----HAvfyeDPTTGKFRFDMPAQsFSVAGQYKqAFFRVMK--DY----RNIATLEFKFEVLADM-VVTGL--V 146 Lactobacillus...
Q03G10          78 kIWDHK-----SstiiDAQAGRFRYTFPKRaMAIAGSYKqAFFEIFR--EG----TRLATLEFNFEVLADL-VEENI--I 143 Pediococcus p...
4DIV_A         132 DSNYWWTFKELYRIFNK 148
Q9CFT4         132 NNKIDDFTKLLFENMPQ 148 Lactococcus lactis subsp. lactis
jgi:Clopa_2781 129 SSDEFPMLTQALAEVTD 145 Clostridium pasteurianum BC1
WP_015613966   127 STNQFTALDTALAEVTD 143 Clostridium pasteurianum
WP_015615132   127 SSSQFTALDLALVEVTD 143 Clostridium pasteurianum
Q2FX74         129 --AKEIDVKLVDDAITR 143 Staphylococcus aureus subsp. aureus NCTC 8325
WP_011101127   130 SESYLSEYEQLISELKD 146 Lactobacillus plantarum
BAK21829       129 SKDYVSDYQLLVQQLQQ 145 Melissococcus plutonius ATCC 35311
WP_011475959   147 PRDYISPLDDLFNTIKE 163 Lactobacillus salivarius
Q03G10         144 PSDYITPFEDLYGKLKE 160 Pediococcus pentosaceus ATCC 25745
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