Conserved Protein Domain Family
NPCBM_assoc

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pfam10633: NPCBM_assoc 
NPCBM-associated, NEW3 domain of alpha-galactosidase
The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases. The domain is associated with the NPCBM family, pfam08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases.
Statistics
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PSSM-Id: 402322
View PSSM: pfam10633
Aligned: 22 rows
Threshold Bit Score: 52.3921
Threshold Setting Gi: 334305794
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q026F9           389 FSPGSSQNTTLTFTNTTGAPVVGVQLSLSVPRQWTsvvTGASTTSATiagPVAPGASVSATFKVTSGPVAFNGD--LVGN 466  Candidatus...
tigr:AAur_1465  1055 VQQGKAQDFVTTFVSDEPAAISGLAVALELPEGWTa--TPSTPATAP---TLPAGGTLTTTWKITAPASAD-GDypITAK 1128 Paenarthro...
A9WNA0          1058 IEQGQTNTFSASFSSSEAQSIAGLSVALDLPAGWTa--SAATPATAA---TLPAGGSLETQWKVQVPADAD-GDytIKAK 1131 Renibacter...
P96937          1007 gQPGDDVVLRLTAASDCTDSVLGGVVDVVCPLGWP-----ATPARLPf--TLGAGAHLQADIALSIPAGAPPGPypVRAQ 1079 Mycobacter...
Q73SF3          1200 aDPDSRVTLRLSAASDCTDATLAGAVVLRCPDGWS-----ADPAELPl--RLCAGQHLQADIAVSVPARAAPGLypVRAE 1272 Mycobacter...
WP_012392899    1193 AEPGSQVTLRLTTASDCTDSSLRGLIEVRFPDGWS-----VAPRRLPf--DLGAGEYVETNVMVRIPATAGPGLypVRAQ 1265 Mycobacter...
tigr:MSMEG_1361 1171 AEPDSQVALRLTVASDCTDAPLHGRVRVTVPPGWT-----VATTELSf--VLPPDEYLETEVVIDIPPGAEPGLypVRAE 1243 Mycoliciba...
Q9S2C9           434 TEAGRTVRITSEATDLGGTAAHSVSVALTGPDGWRv--TPRSATSAR---ALKPGATLATDWDVVVPAGTSTGDriLTLT 508  Streptomyc...
Q82N28           437 LEAGRTVALTSALTDLGRTPAKRVSVTLSGPRGWRv--RATSPTTAG---TVPTGRSLRTKWKVTAPDGTAAGSydLTLK 511  Streptomyc...
WP_011776772     832 VFQDQETTVTAAFVNTGTKAKSNVVLTPILPEGWTv--VSSSGATAA---KVDGGAATTATFVIKPGSSAKAGQqtVRVS 906  Paenarthro...
Q026F9           467 ARFT 470  Candidatus Solibacter usitatus Ellin6076
tigr:AAur_1465  1129 ASYT 1132 Paenarthrobacter aurescens TC1
A9WNA0          1132 ASYQ 1135 Renibacterium salmoninarum ATCC 33209
P96937          1080 LRVv 1083 Mycobacterium tuberculosis
Q73SF3          1273 LRLT 1276 Mycobacterium avium subsp. paratuberculosis
WP_012392899    1266 LSIT 1269 Mycobacterium marinum
tigr:MSMEG_1361 1244 LAVT 1247 Mycolicibacterium smegmatis MC2 155
Q9S2C9           509 ARHR 512  Streptomyces coelicolor
Q82N28           512 ATYR 515  Streptomyces avermitilis
WP_011776772     907 ASYV 910  Paenarthrobacter aurescens
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