6CFI


Conserved Protein Domain Family
BHD_3

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pfam10405: BHD_3 
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Rad4 beta-hairpin domain 3
This short domain is found in the Rad4 protein. This domain binds to DNA.
Statistics
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PSSM-Id: 402157
View PSSM: pfam10405
Aligned: 183 rows
Threshold Bit Score: 60.1533
Threshold Setting Gi: 209878516
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CFI_A        457 ITKNTFGNIEVFA-PTMIPGNCCLVe---------------------N-----------------------------PVA 485  Saccharomyces...
XP_001483816  528 LPRNQYGNIEIYR-PWMVPKKTKWLtlsdiegilsrykkssftcpiaE-------------------------------- 574  Meyerozyma gu...
EFC48974       92 IPKSDKGSYELWN-DKFLPIGCCHIstnn---------------------------------------------eplKGL 125  Naegleria gru...
Q5CXD4        550 IPKDHFKSINISI-KGNIPNSCVHIkdsceglnndk------------------------------vmftsryystwKTE 598  Cryptosporidi...
ESS28553     1767 LPDNGHGNIEVGK-LGQVPIGAVHIs---------------------LtdfhcsasssslassssgkqatplsvaslGGA 1824 Toxoplasma go...
EFN50605      245 IPTNEHGNVEVPPlAKVMPAGLVHLn--------------------------------------------------mPYV 274  Chlorella var...
CBZ12973      708 IPHHGRTSWYILL-DKAPPQGIVHLt--------------------------------------------------qPQI 736  Leishmania ma...
Q4DUA3        672 lPLHGKTRWYVLL-GKPVPEGLAYIq--------------------------------------------------rPNI 700  Trypanosoma c...
Q38DK1        636 IPKHGNTQWYILL-DKPAPIGLVHMq--------------------------------------------------qPNI 664  Trypanosoma b...
XP_002140699  564 VPVNQFHNVDLTN-NQQVPLGCIHV----------------------EdnyelseedsmegqrsfrstwivsweetaKRA 620  Cryptosporidi...
6CFI_A        486 ikaa--rflGVEFAPAVTSFKFErG---------STV-K----PVLSGIVVAKWLREAIET 530  Saccharomyces cerevisiae S288C
XP_001483816  575 ---------AIEYVPVVVGFEYV------------SR-NgqavPVKKGVIIHEHQENAVKK 613  Meyerozyma guilliermondii ATCC 6260
EFC48974      126 tiva--rklKIDYSRAMIGFEFK---------------HkrsiPIYDGIIIHSKNEQLLRm 169  Naegleria gruberi
Q5CXD4        599 nivdiikrsNIDYARAFIGHDFKnGs----------------kPNYDGVIIKKKDVTLLqs 643  Cryptosporidium parvum
ESS28553     1825 lvaa-avkcGVEFKPAVVAFERKs---------vSLS-ApvwvPVRDGVVVLEADEARVRE 1874 Toxoplasma gondii VEG
EFN50605      275 vntc--kalGVEYARALVGFARNrF------------------PQVEGVVVWEEDQQRVVD 315  Chlorella variabilis
CBZ12973      737 srva--rrmKLDFCLAVVGFerr--------rtdEHR-RghweTVINGIVVKETDSVALLH 786  Leishmania major strain Friedlin
Q4DUA3        701 arva--rlvDVEFGHAVMGFqrr--------rldERR-FshweAVFDGIVVREADAANLLH 750  Trypanosoma cruzi
Q38DK1        665 irva--rrmNIDFGIVVTGYrrr--------rlnEAR-SsgweVVTDGIIVKETNTGSLVK 714  Trypanosoma brucei
XP_002140699  621 ---------NISYGRALVGFKYSgGykkgisskfSRNlNskaePLYNGIIIKEEDYQRLLE 672  Cryptosporidium muris RN66
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