Conserved Protein Domain Family
RRM

?
pfam10378: RRM 
Putative RRM domain
This is a putative RRM, RNA-binding, domain found only in fungi. It occurs in proteins annotated as Nrd1 yeast proteins, which are known to carry RRM domains. It is not homologous with any of the other RRM domains, eg RRM_1 pfam00076.
Statistics
?
PSSM-Id: 402136
View PSSM: pfam10378
Aligned: 13 rows
Threshold Bit Score: 65.4034
Threshold Setting Gi: 528293613
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q6BMX1          2 AP-----PVTPLDLSYSQSMLPSNLLVNSPYIqqTqnivpmSPILPRQYAPPSLNLS 53   Debaryomyces hansenii
Q6CSF4         62 IPgtvsiPQTPFDPVYGITLLPSHLLVGSPFV--N------TPQTGGPMSAGTGANG 110  Kluyveromyces lactis
Q75DZ5         56 MPp---vPQTPFDPTYGASLLPSHMLMGSPFL--S------TPLRPQAHFHPSTPGH 101  Eremothecium gossypii
CAR21952       45 VPp---aPQTPFDTSYGVSLLPSHLLMSSPFL--A------TPGMGSASPHRAGGSR 90   Lachancea thermotolerans CBS 6340
EDO14695      118 IPn---aPPTPFDSAYGASLLPSHLLMGSPFV--S------TPTMGQSYSQQFARPS 163  Vanderwaltozyma polyspora DSM 70294
XP_011271776   19 VPq---vPQTPFDMAYGSSLLPRQLLVGSPFIqvQ------SP-LPSPHHTSFRNHG 65   Wickerhamomyces ciferrii
ESX02204       64 vPm---sPTTPFDVNYAKGMLPRQLLVSSPFI--Q------SPMAHSQAPPQSAHVD 109  Ogataea parapolymorpha DL-1
Q59P41         32 SQy---tPITPFDISYGQSMIPSNLLMNSPYF--T------PPPTASQYFPPQYSRN 77   Candida albicans
XP_003679394   50 tgpvmnaPPTPFDTAYGVTLLPSHLLMGSPFV--S------SPNLFQQPHHHQHAHQ 98   Torulaspora delbrueckii
CCU81281       75 MPt----PGTAFDMNY-TPLLPSQLLLGSPFQ--S------GTSQFQNYASFQQQNT 118  Blumeria graminis f. sp. hordei DH14
XP_003686968  104 LPn---pPPTPFDYAYGTTLLPSHILMNSPFV--S------TPN--KSYLSFQASPS 147  Tetrapisispora phaffii CBS 4417
XP_003954856   70 LPn---aPPTPFDTAYGATLLPSHLLMGSPFI--S------SPNVPTPQQQYFLQQQ 115  Kazachstania africana CBS 2517
Q6FXF4        168 YQn---vPPTPFDTAYGASLLPSHLLMGSPMI--S------TTNLPRDNNADLLAGG 213  [Candida] glabrata
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap