Conserved Protein Domain Family
Nefa_Nip30_N

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pfam10187: Nefa_Nip30_N 
N-terminal domain of NEFA-interacting nuclear protein NIP30
This is a the N-terminal 100 amino acids of a family of proteins conserved from plants to humans. The full-length protein has putatively been called NEFA-interacting nuclear protein NIP30, however no reference could be found to confirm this.
Statistics
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PSSM-Id: 401993
View PSSM: pfam10187
Aligned: 68 rows
Threshold Bit Score: 52.1996
Threshold Setting Gi: 340960454
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:OSTLU_26562  58 FVTESELERLRALGgSDGGDASGASDARNdda-----nagKPLYQILAERREEKDREFQEQWAsMKVGKnKPLDEEEVEF 132 Ostreococcus...
EPB91734          9 FVSRAVVEDDQEKQlESDGNQKEVVVQEAyd--------pRTLYERLQEQRTLKEEKFAEESR-LSNQI-KRVDEEEAEY 78  Mucor circin...
EIE90716          9 fvSRSIVQANTEQTlESDKKTSEVKQDyd----------pRTLYERLQEQKTLREEKFAEESR-LSNHI-KRIDEEEAEY 76  Rhizopus del...
CCD25613         33 FISEGNADLESQEA-KAKIEQTKFELQGKir-------srKSLRAQLRSNAISKNRKFNKLVK-ERESF-NRLNKEEINF 102 Naumovozyma ...
XP_003061758     57 FVTETELMEIKAKRgGAlrpedg------------tmeadKTLWAVLQEAKDAKQEAFEEGWKtMKQGVyKPLDDEEAEF 124 Micromonas p...
XP_002509004     71 FVTESELAEIKAKRgGAlrpedg------------tmepeKPLWQVLQEAKDAKEEAFQEGWKtMKQGIyKPVDEEEVEF 138 Micromonas c...
EEY68791         15 FVSTSVLTSSDGLFgDNVEEKRVSEAPAPrsed---aagyKPLYEQLQERKERKDSEWKEKNNpFAPP--KGLDDEEFEY 89  Phytophthora...
CBN79705          6 FVSTSVLESKDGIDfNEEVRKESEDVreaeri--akeadkKPLWEQLAGKRDEKQAKFDAVRAsMFAPP-RALDDEESNF 82  Ectocarpus s...
EFC37805         59 lnnesssSTSNQQHsNPKWTSLLESRESSladee-eeadtRPLYERLMENKLKKQQELEQV---IGNQApRSLDEDDILY 134 Naegleria gr...
XP_003322159     18 FVSSSDLETARQKR-EEEWKATYQRLGQEappmpneeydgRSLYEKLKETKDKKQEAFEEKLK-FKNQF-RALDDEEVAF 94  Puccinia gra...
jgi:OSTLU_26562 133 LDEIESERRAAETKRKREEDGELEAFK 159 Ostreococcus lucimarinus CCE9901
EPB91734         79 FRTLSDEKEKLEYQRKIKETLELEEYR 105 Mucor circinelloides f. circinelloides 1006PhL
EIE90716         77 FKVLSDEKKKLEEERKRNERLELERYR 103 Rhizopus delemar RA 99-880
CCD25613        103 FKQIESEKLSKEKETERFLQKKLENFd 129 Naumovozyma dairenensis CBS 421
XP_003061758    125 IDEVETRKRSEERRAEEREKSEVDAFK 151 Micromonas pusilla CCMP1545
XP_002509004    139 LDEVADRRREEEQRLKQREQDEAEAFR 165 Micromonas commoda
EEY68791         90 IQDLESKKEDVERQRQAQHEEDLAQFl 116 Phytophthora infestans T30-4
CBN79705         83 LQGVEAQRLEAKERKKKWETEELRGFa 109 Ectocarpus siliculosus
EFC37805        135 LKEQEEKLKNERLEIINKEKEEIQKYl 161 Naegleria gruberi
XP_003322159     95 LDDAAEEKRAIEMAKQEEIQKEMKRFK 121 Puccinia graminis f. sp. tritici CRL 75-36-700-3
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