Conserved Protein Domain Family
SCHIP-1

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pfam10148: SCHIP-1 
Schwannomin-interacting protein 1
Members of this family are coiled coil protein involved in linking membrane proteins to the cytoskeleton.
Statistics
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PSSM-Id: 401957
View PSSM: pfam10148
Aligned: 6 rows
Threshold Bit Score: 295.284
Threshold Setting Gi: 118150598
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFX75062       41 KRNDREEIRRRLAMGVEaEDGQ------ESDKGKRPSLQSRLQSGMNLQICFMNETADGGDIDNQKELLDNLKLGSPQS- 113  common water ...
1_pfamImport    1 RRNDREEIRRRLAMGAE-DDYFskivnpENRPIRKPSFQSRIKTGRNLQICFVNEAQSDTESVSSDSESCPTLSRLPRGn 79  
NP_001071259   12 QRNERESIRQKLALGSFyDDGQit--ftGCSKSGKNCLSSRLQNGVNLQMCFVNDSSSDRDSDAEDSR-TETSLDTPLS- 87   zebrafish
XP_021149834  106 QKNERESIRQKLALGSFfDDGPgl--ytSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSK-TETSLDTPLS- 181  rock pigeon
EFN70358      947 RRNDREEIRRRLAMGPDaEDLR-------AERGRKPSLQSRLQSGMNLQICFMNETSSDTESPGSEND------TSPGSt 1013 Florida carpe...
EFA04405      114 RRTDREEIRRRLAMGSE-DDYY------TDRPGRKPSLQARLQSGMNLQICFMNETVSDTESPNSDNECPLTNPKQPKTc 186  red flour beetle
EFX75062      114 ---------DIKNPYVSLPVVSSLKQPKl-----qQELAELDFFSQQAKLQMEARTALAQAKELARVQMQV------ERQ 173  common water ...
1_pfamImport   80 sinq-ikklQAANPYSSNPLSVSCTDGKns----qLENTDNDFFTKQARLQIEARMALAQARIWRTCKWRVdsisfiEKQ 154 
NP_001071259   88 ---------------PMSKQSSSLSDRDtgeedldSEDS--EFWRLQRRLQEEARVALALARPMARMQVEV------ERQ 144  zebrafish
XP_021149834  182 ---------------PMSKQSSSYSDRDtteeeseSLDD-MDFLTRQKKLQAEAKMALAMAKPMAKMQVEV------EKQ 239  rock pigeon
EFN70358     1014 ptslgskqlGGKQHAPMRPQVLSLPSLRlesanstPPVDEADFFARQARLQTEARMALAQAKEMAHMQMEV------ERQ 1087 Florida carpe...
EFA04405      187 pktspektlP-----PARPATLSLGQPLlqp--vtQPMTETDFFARQARLQTEARMALAQAKEMARMQMEI------ERQ 253  red flour beetle
EFX75062      174 QR--KHTRISDL------VRQSLEKLGIPFPWDCRRLSRQILTELNIAQLQVIVNDLHTQIEGLNEELVQLLLKRDDCHM 245  common water ...
1_pfamImport  155 KQ--SLSPVTEI------IQTSMKKVGVPLPQQKRRVSRQTLTDLNVAQLQVIVNDLHSQIETFNANLVQLLMDRDDLHM 226 
NP_001071259  145 IQihRRSPVADLlphlphISECLMK---------RNLRPVDMRDMSLGQLQVITNDLHSQIQGLNEELVQLLLMRDELHM 215  zebrafish
XP_021149834  240 NR--KKSPVADLlphmphISECLMK---------RSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHT 308  rock pigeon
EFN70358     1088 RL--KQSPITEM------VRCSLEKVGVQLGEDRRRLSRVLLTELNVAQLQVVANDLHARIAALNEALVEGLLRRDDLHM 1159 Florida carpe...
EFA04405      254 RQ--KKSPITEM------VRNSLEKVGIPFPEEKRRLSRQILTEMNVAQLQVIVNDLHTQIETLNESLVKFLMDRDDLHM 325  red flour beetle
EFX75062      246 EQDSMLVDIEDLTRFLTAKQA 266  common water flea
1_pfamImport  227 GQDAMLVDIEDLTRYLSAKEQ 247 
NP_001071259  216 EQDAMLVDVEDLTRHAHSQQR 236  zebrafish
XP_021149834  309 EQDAMLVDIEDLTRHAESQQK 329  rock pigeon
EFN70358     1160 EQDSMLVDVEDLTRYLGAKQE 1180 Florida carpenter ant
EFA04405      326 EQDSMLVDIEDLTRYLGAKEQ 346  red flour beetle
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