Conserved Protein Domain Family
zinc_ribbon_13

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pfam09855: zinc_ribbon_13 
Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
This domain, found in various hypothetical prokaryotic proteins, as well as some Zn-ribbon nucleic-acid-binding proteins has no known function.
Statistics
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PSSM-Id: 401716
View PSSM: pfam09855
Aligned: 38 rows
Threshold Bit Score: 81.4628
Threshold Setting Gi: 505404680
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_006212369            12 VCSKCGGNHCQTKEVSMSGAGLSKMFDIQHNHFLFVSCTNCGYVEVFNPDILEGKkrgqlgSILDVFFG 80  Paenibacillus
WP_006056358            11 GCPKCGHTETEMDSIATSGTGLSKFFDVQNRSFTVVTCASCGYSELYRKKSSG--------NLADLFLG 71  Halogeometricum ...
ADD04946                29 GCLKCGHTETAVDDISTTGTGFSKFFDIQNRRFRVVSCTNCGYAELYKGGKTN--------DLTDLFLg 89  Natrialba magadi...
PRJNA59739:HALDL1_06245  7 GCPKCGHDEVDVGNISTTGSGLSKMFDVQTNKFRTVTCTSCGYTELYKDVGSRGG------DIADIFFG 69  Halobacterium sp...
jgi:Halxa_1835           7 GCPKCGHTETEMDEIATTGSGLSKMFDIQNRKFMVVSCTNCGYSELYRGQSSG--------NMVDLFLG 67  Halopiger xanadu...
CCG44514                 5 GCIKCGSTDAEENHVSMTGSGLSNILDVQNHQFTLVYCKNCGYSEFYNKEAAEEG------NVFDYFFG 67  Halobacillus hal...
WP_015594852             5 GCIKCGSRETGTKEVAMTGTGLSKMFDLQHNTFTVVFCKNCGYSEFYNKKTSAAS------NIIDLFFG 67  Bacillus sp. 1NLA3E
BAK16287                 5 GCIKCGSKDASKKEVAMTGTGLSKMFDVQHNQFIVVYCNNCGYSEFYNKKSSSAS------NIFDLFFG 67  Solibacillus sil...
C0H447                   5 GCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAG------NILDLFFG 67  Bacillus subtili...
Q58627                  10 KCPKCGNTEFFEKEVAMTGTGLSKIFDIQHNEYIVITCKKCGYSEFYDKSIVKSKdn--lmNILDIFFG 76  Methanocaldococc...
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