Conserved Protein Domain Family
Cas_VVA1548

?
pfam09652: Cas_VVA1548 
Putative CRISPR-associated protein (Cas_VVA1548)
This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.
Statistics
?
PSSM-Id: 401551
View PSSM: pfam09652
Aligned: 12 rows
Threshold Bit Score: 70.0495
Threshold Setting Gi: 324316319
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
O26561          37 YIITRHQSTVHWILAklngKGLDRD--VFVTgHLSNEMmlrMRKGDIVYGILPIHLIRRLLRKGVEYFHVVLpHVPYELR 114 Methanothermo...
WP_011813442     4 WFVSRHPGATEWAKR----QGFDVD--RQVE-HLDVEQ---VAAGDTVIGTLPVHLAEGVCCRGAWYCHLIL-DIPPERR 72  Halorhodospir...
jgi:Hhal_0624    4 WFVTRHSGAVEWAQR----RGLAVD--RQVD-HLNPAE---LEVGDRVIGTLPVHLAAAVCERGGRYLHLSL-DLPPQLR 72  Halorhodospir...
Q7MC39          81 WFISRHAGAKQWAVE----QGLEVD--CFIS-HLDIAQ---IGEGDKVIGTLPVQIAASVCEKGARYFHLSL-TVPEIWR 149 Vibrio vulnif...
jgi:Alvin_3142   4 YFVSRHPGAHDWAAE----EGFEVE--AVIV-HLDPAL---IQPGDSVIGSLPVNLAAEVCARGARYLNLSL-DLPPELR 72  Allochromatiu...
WP_013159883     3 tVVTQHSGLVDYLRE----QGYPID---EVKtHVQSAE---EIRGRDVVGVLPPHLAAE----ANSVTTVNL-RLSREDF 67  Meiothermus s...
jgi:Deipr_2307   4 iVITRHQGLLEFLRE----EGL-LDgsERVQaHA-SEE---DVRGKHVIGVLPLHLAAL----AAQVTVVEMgHLPASER 70  Deinococcus p...
Q82XX6           4 WLVTRHPGAIEWVAR----QGIQWD--KHAA-HLDPCE---ITAGDTVIGSLPINLAAEICNRGARYFNLSL-NLPAHLR 72  Nitrosomonas ...
WP_015258286   410 YFVTRHPGAAEWAEQ----ESIPVD--EFVH-HLDTAR---IQWGDTVIGTLPVQLIAQVCERGGRYHHLTL-DLPAEFR 478 Thioalkalivib...
WP_013419514     4 YFVTRHEGAIDWALR----KGIEAQ---LVT-HLDPSK---IEKGDVVLGTLPVQIIAQINERGARYLHLEM-SLPADQR 71  Rhodomicrobiu...
Q7MC38           5 YLICKYSGAQEWLSQ----QGIHID--HVVD-SIHLID---VSQGDKVYGDVPVSLLRDLSKKQVSYWEIKA-DIHHSVD 73  Vibrio vulnif...
EIC30028         4 YFITRHSGAIDWARQ----QGIVVD--HQLA-HLDIDM---IDSGDTVIGSLPVNLVAEVCEKGASYIHLSL-RIPEDWR 72  Methylomicrob...
O26561         115 GKELTLKQVKEFGGQIWKIDDI 136 Methanothermobacter thermautotrophicus str. Delta H
WP_011813442    73 GRELSADEMDGMDARLAYYHVQ 94  Halorhodospira halophila
jgi:Hhal_0624   73 GQELTADDMEAAGARLEAYRVE 94  Halorhodospira halophila SL1
Q7MC39         150 GKELSLEQMKACQAKIEEFSVR 171 Vibrio vulnificus YJ016
jgi:Alvin_3142  73 GRELSTEQMRACGARIEEYRVM 94  Allochromatium vinosum DSM 180
WP_013159883    68 GRELSLEEVRERLVSVETYRvy 89  Meiothermus silvanus
jgi:Deipr_2307  71 GRELSAEETRRWHSGIRTFRVT 92  Deinococcus proteolyticus MRP
Q82XX6          73 GRELDAATLTACEARLEEYIVK 94  Nitrosomonas europaea
WP_015258286   479 GRELTADELRACRARLETFTAr 500 Thioalkalivibrio nitratireducens
WP_013419514    72 GIALTADDMERLGAQLIEYEAR 93  Rhodomicrobium vannielii
Q7MC38          74 PTTVEAEYLKRVDAQLIKTELH 95  Vibrio vulnificus YJ016
EIC30028        73 GRELTAEQMVAFGAKLERYRLK 94  Methylomicrobium album BG8
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap