2CCQ,5LJN


Conserved Protein Domain Family
PUB

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pfam09409: PUB 
PUB domain
The PUB (also known as PUG) domain is found in peptide N-glycanase where it functions as a AAA ATPase binding domain. This domain is also found on other proteins linked to the ubiquitin-proteasome system.
Statistics
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PSSM-Id: 401385
View PSSM: pfam09409
Aligned: 90 rows
Threshold Bit Score: 46.4774
Threshold Setting Gi: 122123500
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2CCQ_A         16 ETFLEASKLLLTYADNILR--NPNDEKYRSIRIGNTAFSTRLLPVRGAVECLFEMGFEE---GETHlif------pkKAS 84  
XP_005449169   74 NRFIKALSILEKYGCNLTS--PTRPRYWRSVKHNNPVFRTTVDAIKGGRRVLYLYGY-----TNQQvdglsfpdeveDPD 146  Nile tilapia
XP_003731695   81 vALRDAIGLLFRYGVNLLKpdVSTSTAWRVISFDNSMYSSKVSILKGHKQILYLYGY-----AKELsyglsfpdalrTPN 155  purple sea ur...
EHH63503       70 STLSTALNILEKYGRNLLS--PQRPRYWRGVKFNNPVFRSTVDAVQGGRDVLRLYGY-----TEEQpdglsfpegqeEPN 142  crab-eating m...
Q22CZ5         28 EKLNESLELLLKLINNIGQ--SPFEMKFRKIKSSNPTIKEKIFRFSLAGDLLIHIGFVKkveNQEEfyi------leDKN 99   Tetrahymena t...
CAQ41814      259 DDLKSIIPILCKIVKNILN--NPNALNTRILKSNNDIMKRKILIYPEARNFLLSIGFVEvhvf----------yvmeRVD 326  Plasmodium kn...
Q8IES1        283 ENLKVVLPILCKIVKNILI--NPNILNTRILKSTNNIMKNKILIYQEIKNLLLCIGFVEiyif----------yvmiKVD 350  Plasmodium fa...
A0C5Y6         95 DQLFKTLEIIFKIISNVIM--SPLSQDKQKINICSKTLQNNILKYPSALNYLSKLGWKIeaefll------veykmdNQN 166  Paramecium te...
CAQ39366      219 KELLSSLTILKTYFSNIRD--NILEKKFQKIKKENKVFVEKIKVYEEMLQVFLLVGFEDtgd------------fyeIKN 284  Plasmodium kn...
KAE8633416     57 HSVTTALNILEKYGRNLLS--PLRPKFWRSVKFNNPVFKTTVDAIEGGRFVLSLYGY-----SQSLpdglsfpdsvqEPD 129  tropical claw...
2CCQ_A         85 VEQLQKI 91  
XP_005449169  147 TEKVAAv 153  Nile tilapia
XP_003731695  156 TDTVAKV 162  purple sea urchin
EHH63503      143 EHQVATV 149  crab-eating macaque
Q22CZ5        100 LIVLLPF 106  Tetrahymena thermophila SB210
CAQ41814      327 TLLLLCI 333  Plasmodium knowlesi strain H
Q8IES1        351 TLLLLCI 357  Plasmodium falciparum 3D7
A0C5Y6        167 DWKEAVE 173  Paramecium tetraurelia
CAQ39366      285 YPNTYLL 291  Plasmodium knowlesi strain H
KAE8633416    130 VSTVAAV 136  tropical clawed frog
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