Conserved Protein Domain Family
ATG_C

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pfam09333: ATG_C 
Autophagy-related protein C terminal domain
ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in both cytoplasm-to-vacuole targeting and in autophagy.
Statistics
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PSSM-Id: 401321
View PSSM: pfam09333
Aligned: 105 rows
Threshold Bit Score: 69.0775
Threshold Setting Gi: 947101772
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
GAC97086     1977 VSRYASKPEDMTQALSQAYSGLTEGLTSAAQTILAIPMEVYDPsdargasgGGGAARGAgsgrgPVVKAVPIAILKGAQG 2056 Pseudozyma hu...
KRH50264     1873 TDVRSNQPKDAQEGIQQAYESLSDGLGKSAAVLVQNPLKKFQRg-------SGAGPALA-----AAVRAVPAAAIAPASA 1940 soybean
CBI32426     1832 sNIRTNQPKDAQQGIQQAYESLSDGLGRSASALVQTPLKKYQRg-------AGAGSALA-----TAVQAAPAAAIAPASG 1899 wine grape
XP_015061947 1877 TSVRFNQPRDSRQGIQQAYESMSDGFSKSASALIRTPIKRYQRg-------AGMGSAFA-----TAVQAAPAAAIAPASA 1944 Solanum penne...
XP_004997303 2810 RSKFASQPSGLKHGLSMAYDALSSGVTEAYYDLFVRPREHARR--------RGTSALLR------AIGSVPGAGLRPVIA 2875 Salpingoeca r...
OCA50386     1479 REAMNKQPSGIREGITRGGKGLVSGFVSGITGIVTKPIKGAQK--------EGAAGFFK-----GVGKGLVGAVTRPTGG 1545 tropical claw...
EFA85868     1230 slTRQQQPDSISQGAQRAVSQVFGGFRNAAMGILYKPIENYKS--------DGAKGFLS-----ALLWGVPRVVVDPVVG 1296 Heterostelium...
XP_004353925 1443 nSIWVSQPENLSQGAHKAMSQVIGGFYNAAMGILSKPITSYQE--------SGTKGFLT-----SLLWGVPGVVVSPMVG 1509 Cavenderia fa...
RQL89121       49 TNVRHNQPRNAKQGMRQACENIGDGIGKTASALVRTPLKKYQRg-------DGAGSTFV-----TVVQGVPTAAIAPASA 116  Brassica cretica
XP_009387564 1452 ANVRYNQPENVHEGIQQAYESLSDGFGRTISALVGTPLKDFQHg-------AGTGSALA-----TAVHAVPAAAIYPLSY 1519 wild Malaysia...
GAC97086     2057 ATQAIAKTMQGVQVTLgDLENVK--EGKYK 2084 Pseudozyma hubeiensis SY62
KRH50264     1941 CASAVHYALLGFRNSL-DPERKKesMEKYc 1969 soybean
CBI32426     1900 LARAVHCALLGVRNSL-DPEHKKesMEKYm 1928 wine grape
XP_015061947 1945 TARAVHCALLGVRNSL-NPERKKesLEKYl 1973 Solanum pennellii
XP_004997303 2876 LCQATALTLQGIRNGL-SPERMQdlQNKYK 2904 Salpingoeca rosetta
OCA50386     1546 IIDMASSTFQGIKKATd-------sSDDVe 1568 tropical clawed frog
EFA85868     1297 VAEGFTTFSTSIRNSL-DSSRIIneRKKYK 1325 Heterostelium album PN500
XP_004353925 1510 LAEGFTSFSIGLRNSL-DSSRIVndHKKYK 1538 Cavenderia fasciculata
RQL89121      117 CVRAVHSALVGIRNSL-DPEHKKesMEKYl 145  Brassica cretica
XP_009387564 1520 SARAVYSTLLGLRNSM-DPDHKRqsMEKYR 1548 wild Malaysian banana
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