1WLF


Conserved Protein Domain Family
PEX-1N

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pfam09262: PEX-1N 
Peroxisome biogenesis factor 1, N-terminal
Members of this family adopt a double psi beta-barrel fold, similar in structure to the Cdc48 N-terminal domain. It has been suggested that this domain may be involved in interactions with ubiquitin, ubiquitin-like protein modifiers, or ubiquitin-like domains, such as Ubx. Furthermore, the domain may possess a putative adaptor or substrate binding site, allowing for peroxisomal biogenesis, membrane fusion and protein translocation.
Statistics
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PSSM-Id: 401267
View PSSM: pfam09262
Aligned: 103 rows
Threshold Bit Score: 84.8622
Threshold Setting Gi: 75031167
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WLF_A               102 QQVEVEPLSADDWEILELHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVTLm-----PA-APYGRLETNTKLLI 175 
XP_001948878         103 ERVFVTPVTNADWDLLMLNNVSLQDRILQQLQIVHKNRIFPIWVSKFVHLKICIDDL------ENgLQVGSLKDSTEIVV 176  pea aphid
ETN61509              92 KRVEVSAVTEKDWEMLELSSNRIQSILLDQTRIVTKGQNLVVWINDSISIKIRIKFTip------tLPFGRLENDTELVV 165  Anophe...
XP_001956437          93 rSVHVTPVSSKDWEIIELSTEKISGSVLEQTRIVNSSQILIVWINKSMQVALTVDRLkp------hMNYGRIDHNTELVV 166  Drosop...
XP_001813222          89 QSVTITAVDSNDHLVLESLAENVQSTLLEQIRVLTNGQKFVIWIGATIHVTVTVCDIk-------pISPGKIDNLTEVVI 161  red fl...
EFN74069              58 SSIKIAPRTTNDRELLELQMERVQSNLLSQVRIVAKGQPIVAWISKFSSVTFIVEDSep------kFAYGSLQQFTEVHV 131  Florid...
XP_001606441          89 tSLLVAPRSSHDREILELQCENVQANLLNQISVVAKDQTIVAWVSKFLSVTLIVTQLnp------qFKYGRLQENTEIHV 162  jewel ...
Q4DTV3               100 SRVLVSPASVDESEVAEQNALRIETQLLRQVQVIFPGMTISVVVFSDVHARVVVQRIedsqgreLsSGCAVMSEGTEFVI 179  Trypan...
BAB62002             103 SHIEVAPRTEDDYSVIAQSQSSIENEFLNQIRLVSQNMIIPHFLSPGVYVQFRILNIvpas-----nkpVMLNNDTELHV 177  Caenor...
WGS:AATM:SJAG_02619  103 KHVVFEPLTSSDWEIIESNSEWIEAKLLQQARVV-STDIVTIFFPSGSIAQLRVLSIe-----pPvEKCALLANETELSI 176  Schizo...
1WLF_A               176 QP 177 
XP_001948878         177 KP 178  pea aphid
ETN61509             166 EP 167  Anopheles darlingi
XP_001956437         167 AP 168  Drosophila ananassae
XP_001813222         162 ia 163  red flour beetle
EFN74069             132 ld 133  Florida carpenter ant
XP_001606441         163 gd 164  jewel wasp
Q4DTV3               180 AT 181  Trypanosoma cruzi
BAB62002             178 Qt 179  Caenorhabditis elegans
WGS:AATM:SJAG_02619  177 AP 178  Schizosaccharomyces japonicus yFS275
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