1SGV


Conserved Protein Domain Family
TruB_C

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pfam09142: TruB_C 
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tRNA Pseudouridine synthase II, C terminal
The C terminal domain of tRNA Pseudouridine synthase II adopts a PUA (pfam01472) fold, with a four-stranded mixed beta-sheet flanked by one alpha-helix on each side. It allows for binding of the enzyme to RNA, as well as stabilisation of the RNA molecule.
Statistics
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PSSM-Id: 370319
View PSSM: pfam09142
Aligned: 26 rows
Threshold Bit Score: 50.3206
Threshold Setting Gi: 148569964
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SGV_B           236 FARRDLTAAEASAAANGRSLPAV----GIDGVYAACDADGRVIALL---RDEGSRTRSVAVLR 291 Mycobacterium tuberculosis H...
Q6AG41           238 FERLRLTEQQATDLAHGKRLHLAgwegPRGEPVAAIAPSGSLVGLI---EFRGKEARTLVNFP 297 Leifsonia xyli subsp. xyli s...
Q6A7P0           237 FPVVHVTADQAAAIRVGRRLSFT----VPAEVTAIIAETGELLALYrpdDEKDGQSRAICVLV 295 Cutibacterium acnes KPA171202
jgi:Anae109_1144 247 FPVLEVSWAEARDLAHGRALRRE----LAPGKAAARAPDGRLVAVC---AAGDRGLCPERVLL 302 Anaeromyxobacter sp. Fw109-5
Q2IPZ4           244 LAAIRLGEREAWDLVHGRPVPRPp---GTPGMVRALAPDGRLVAVC---APGEGRLRTLRVFL 300 Anaeromyxobacter dehalogenan...
jgi:RoseRS_3755  240 WYAVQVDEASARRLRHGMPLVAPs---GAAPRARAHAPDGTLIAIL---RFDGTYWRPIKVFD 296 Roseiflexus sp. RS-1
OQJ53146         254 FDVLHLTDQEAVDLGHGKKLTTPde-aPTEDPLAAVAPDGRLVGLV---GFRGRTGTSIVNFP 312 Clavibacter michiganensis su...
WP_011981924     243 FPARELTVAEVATVSHGGFLRAG----EHPGPVGAFAPDGTLVALL---GDTARGAKPLLVLA 298 Kineococcus radiotolerans
Q47RU8           236 FPVRRLSAGEARRVVHGHRISPS----GHSGPVGLFAPDGRVLALA---ENRSGSSQPVVVFA 291 Thermobifida fusca YX
WP_012258869     234 WPLVQVDADDANRLRHGMAITATe---PDAPHARAHDPAGKLIALL---KRDGDNWRPVKVLg 290 Chloroflexus aurantiacus
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