2Y9Z


Conserved Protein Domain Family
SLIDE

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pfam09111: SLIDE 
SLIDE
The SLIDE domain adopts a secondary structure comprising a main core of three alpha-helices. It has a role in DNA binding, contacting DNA target sites similar to c-Myb (pfam00249) repeats or homeodomains.
Statistics
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PSSM-Id: 401159
View PSSM: pfam09111
Aligned: 104 rows
Threshold Bit Score: 74.4649
Threshold Setting Gi: 440492849
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2Y9Z_A        180 EKYLKIIENEEEKIKRVKMQQEALRRKLSEYKNPFFDLK--LKHp---PSsNNK---RT-YSEEEDRFILLMLFKY---G 247 
EPR78399      758 NKILNQIQRGEEKILKKQHLKDLLNKFTENNLN--------ISYt---YN-LRS---KI-FTEEIDLELIHLLKKYiddE 821  Spraguea loph...
ELA48473      722 DKILAHIAKGEQKQKKEMIIKMVLKRIFED-NEPLRLKN---------IV-NVR---SRnFTEPIDMAILK--------G 779  Vavraia culic...
ELQ75382      722 DKILAHIAKGEQRQKKETVINTILKRIFED-NEPLRLKN---------IV-NVR---SKnFTEQIDMAILR--------G 779  Trachipleisto...
XP_657207     811 EKLYNSLFKSEQKRKLREKEQEDLAQAIKAKPDDMTVLT---PYvyfgNS-QTD--------PLVDSMMLRKYAEY---G 875  Entamoeba his...
EHY66060      743 DKIRLQVQKGEHKIMRSLKIKEYLREKIKKEGDNFK-----IPYp---IS-NKS---IG-YTEEADRFILRILNKK---- 805  Nematocida sp...
A0C091        146 DKIVKQIERGQKLIEQKTNGQKLIEEKCKHFHQPKYELV--FTPql-yNK-FKS---KY-FSLENDKFLIYMTNEV---G 214  Paramecium te...
A0C3B5        825 NRYMVRIEKTEAQLEQEQEFTDLLNKFMKFFDDPLLEMN--F------NQ-VYK---QTyYTLESDQLIVYATYIE---G 889  Paramecium te...
XP_001019743  857 DKIIKNIERGEQILKQKLVMSDLLKERCKIYQNVKEEFE--FNSai-yNK-SKS---KF-YTTENDKFLIYASYQM---G 925  Tetrahymena t...
CBJ27256      976 RRIKTRVETKEKRLNELNRIMMVTNELMEAVDDPWRNMEvrINQrqggAG-TAGmqlQReWTKDEDRYLLCLTHLC---G 1051 Ectocarpus si...
2Y9Z_A        248 L--DRddvY-ELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLLQCLEK 294 
EPR78399      822 Y--SN-----EKIVKELKNNPDYRYDYFVRTIKPSDVQKRLTTLTQNILK 864  Spraguea lophii 42_110
ELA48473      780 YynRNdseYlQKLLIELKKKHIFNF--FVRTLTVHDIQKRLKALKSALCK 827  Vavraia culicis subsp. floridensis
ELQ75382      780 YyyRKdaeYlQNLLMELKRKHLLNF--FVRTLTLNDIQKRLKALKSALCK 827  Trachipleistophora hominis
XP_657207     876 E--D----W-ERILKEIKEHPLFVFNIYINSYTPQTVKEKIRFLIHNVEK 918  Entamoeba histolytica HM-1:IMSS
EHY66060      806 M--GTpecY-DELWNRIREAEEFSFDYYLKVRTPHDLQKRAQFLFTGLLK 852  Nematocida sp. 1 ERTm2
A0C091        215 Y--GN---W-AQLKQSIRKEPMFRFDHAFKCKSENELKNRVISLVKVLDK 258  Paramecium tetraurelia
A0C3B5        890 F--GR---W-DKIQKYILNHEMSFFDNYMRSLTKKSIKQRVLLLLKNIKK 933  Paramecium tetraurelia
XP_001019743  926 Y--CN---W-PVIIKEIKTNPMFQFDHFFKSRSEYELNKRLQSLLKVVEK 969  Tetrahymena thermophila SB210
CBJ27256     1052 W--GN---W-RKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK 1095 Ectocarpus siliculosus
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