Conserved Protein Domain Family
USP8_interact

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pfam08941: USP8_interact 
USP8 interacting
This domain interacts with the UBP deubiquitinating enzyme USP8.
Statistics
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PSSM-Id: 401040
View PSSM: pfam08941
Aligned: 20 rows
Threshold Bit Score: 235.664
Threshold Setting Gi: 0
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_011403536 145 ELREKITNQSLVIKTLSDQVSILQQELSDQRQEMTILKELVRSSASSSsnslrhtlsllPPLPPLssaspssVSSSqSNy 224 Amphimedon quee...
XP_011664319 137 ELRLLVQNQTNKLSEQETELTEIRSQLSEHRREMQMLKEYIRAIRISNpn-------tsPSVRAI-------EDEI-EN- 200 purple sea urchin
Q29PB4       136 ELRKIVQDQATEIAVLKHTQVDHEIRIGVQIRELELLQYYLAALRSTS-----------PIMRNV-------GNQL-DG- 195 Drosophila pseu...
XP_014760436 137 ELRELVQNQMAEIAELKETQATQELRIVIQRRELELLQYYIAALRSTN-----------PVMRNI-------GEQL-DR- 196 Drosophila anan...
Q9VJW5       137 ELRELVEKLAKEVSDLKQKQSDMEEQSSSQRREMELFQYYIAALRSTN-----------PMLRNI-------GEQL-DR- 196 fruit fly
XP_002062044 137 ELREMMQQQQTEITELKDLQVTQQQRVESHRRELELLQYYILALRSTN-----------PVMRNI-------GDQL-DR- 196 Drosophila will...
XP_002066541 137 NLRELVTKQRDEVIRIKEALASQHQRISYHRRELELVQHYITGLRYTN-----------SVVGNI-------GDQL-ER- 196 Drosophila will...
XP_002057860 137 ELREQLQDQISEISELRDMQAHQERRLSEHRRELELVQYYVAALRSTN-----------PVIRNV-------GDQL-DR- 196 Drosophila virilis
1_pfamImport   1 HLRSVVQQQQTRIAELEKTSAEHKHQLAEQVGQEHQAWAAGAALG--------------GKVTGL------------TQn 54 
XP_004053411  66 HLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVN-----------PNLQNL-------EETI-EY- 125 western lowland...
XP_011403536 225 pDEVEHaiqtsqWLSLLRPARIRHWGGIISTPDSILQSIIRQALSSSGCPQYLLVELMANAHERRWPPGLSVLETRQLNR 304 Amphimedon quee...
XP_011664319 201 -NEVVR------WVNSMPLARVTRWGGMISTPDVVLQTVIKRSLLESHCPAHIVAELMENAHERNWPPGLSTLETRQMNR 273 purple sea urchin
Q29PB4       196 -YAVSH------WCAGLPTARVNNWGSVVSTPDNEMHFLVRNSLRASGCPMHLLNTMVEHCHEERWPAAMATLQRRRANQ 268 Drosophila pseu...
XP_014760436 197 -YSLMQ------WGNGLPLANVRTWGSLISTPDTPMHVMVRDVLRTCGCPMHLLNLMVDPCHETRWPDALITLDARRENH 269 Drosophila anan...
Q9VJW5       197 -FSLMQ------WGHGLPLANIHTWGSLISTPDNPMHLMVRDVLRESGCPMHMLNMLVERCHEDRWPEGLMTLDDRRENQ 269 fruit fly
XP_002062044 197 -YSLMQ------WGSVLPAATIRNWGSLISTPDIFMHMRVRDGLSSCSCPMHLINKIADRCHEDRWPNGLISLEARRENQ 269 Drosophila will...
XP_002066541 197 -FSLMQ------WGNNLRLAHITNWGSLISTPDIFLHMRIRDGLGASSCPLNLINKIADRCHEERWPEGLLNLNTRRENH 269 Drosophila will...
XP_002057860 197 -YSLMR------WGRSLPLASVRTWGSLISTPDTPMHMMVREGLRASGCPMHLINVLMDCCYEDSWPEGLTTLEMRRMNL 269 Drosophila virilis
1_pfamImport  55 pKEIIKkgvkmwWVDSLHP-RETRWGG-CSTPDAVLQAVIKRSLVE-GCPASITNELIENASATG-PQGLATLETRQMNH 130
XP_004053411 126 -NEILE------WVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLATLETRQMNR 198 western lowland...
XP_011403536 305 SRYEQYVTKQVP----GKQAVVIMASENEHMGDNMIVSPGMVI---IFAHGVD 350 Amphimedon queenslandica
XP_011664319 274 HTYEQYVCRRIP----SKQAVLVMACDNAHMGEDFTLDPGLVM---IFAHGIE 319 purple sea urchin
Q29PB4       269 AQMTQFVSRLIRplssGRQCLCIFGVDNYHVPENLRPFLGITM---IFVDGVE 318 Drosophila pseudoobscura
XP_014760436 270 HRLNQYVTRILPplvsGKPCVVVLGGDNTHMPENLRPTLGLVM---IFVDGVE 319 Drosophila ananassae
Q9VJW5       270 HLMSRYVTRLVPglviGKPCVVVLGGENTHMPENLRPILGLVM---IFVDGVN 319 fruit fly
XP_002062044 270 DSFVDFSTRLLPflvtGKSCVVVLGGDNLHMPENLRPKLGLIM---IFVDGVv 319 Drosophila willistoni
XP_002066541 270 HRLMLYVTRILPifmtGKSCVVMLGCDNTHMPENLRPGVGMAM---IFDDGVv 319 Drosophila willistoni
XP_002057860 270 HRLAQYVTRLLPivitGKPCVVILGGDNAHMPENLRPVLGVIM---IFVDGVD 319 Drosophila virilis
1_pfamImport 131 RYYENYVAKRIP----GKQAVVVMACENQHMGEDMVLEPGLFLgfvIFAHGVE 179
XP_004053411 199 RYYENYVAKRIP----GKQAVVVMACENQHMGDDMVQEPGLVM---IFAHGVE 244 western lowland gorilla
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