Conserved Protein Domain Family
HBS1_N

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pfam08938: HBS1_N 
HBS1 N-terminus
This domain is found at the N-terminus of HBS1 proteins. It interacts with the ribosomal protein rpS3 at the mRNA entry site.
Statistics
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PSSM-Id: 401037
View PSSM: pfam08938
Aligned: 94 rows
Threshold Bit Score: 49.8815
Threshold Setting Gi: 344299569
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGV60645       3 DDY-S-DDGSVEFse--dLLNDQEYDQLLDTLPVLKQKLAkfdkgsqiNELVLKESLYDHYFEVEEALEDLKVSHKLK 76  Yamadazyma tenuis...
EMC99618      12 EDL-YdDDEVDEGqg-eeQLTQEDRDNFANLTPVVRAELEeag--lqaSDREIQDALWNYYWDVGKSVNYLKNSRTPR 85  Baudoinia panamer...
EME89327      12 DDL-YsDEEGYEDgqdaqGYTAEDKDNFANLTPVVRAELEeng--iqaTSAQIEEALWHYYWDVGKSVAYLKNSRTPR 86  Pseudocercospora ...
XP_016765745  12 DDV-YsDEEEYAEeg-pgEYSAEDKENFAALTPVVRAELDeag--ipaTTKQIEDALWHYYWDVGKSVAYLKNSKAPQ 85  Sphaerulina musiv...
XP_003853343  19 DDYgYgEETEGVDa---qGRTAEDLENFATLTPVVRAELDeag--vpsTTKDIEDALWHYFWDVGKSVAYLKNARTPR 91  Zymoseptoria trit...
EME49378      12 DDV-YsDDEYGEEda-dsGYTQEDKDNFATLTPVVRAELDqar--vpaTTQQIEEALWHYYWDVGKTVAYLKNATTTK 85  Dothistroma septo...
EMD88665      23 DDY-YeEEGDEGGag--dGMSEEDKEQMRVGTIRVREAMGdms--dftSDEQIQEALWHYYYDVGKSVSYLKNKLGIA 95  Bipolaris maydis C5
Q0U4R1        19 DDY-YsEEEAAAGd----GMTEDDKEQMRIGTISVREALGefe--agvSDAQIQESLWHYYYDVGKTVTYLKNKLGGA 89  Parastagonospora ...
EKG11506      14 DDF-YdDDDYADGae--dEMSEEDKEQLRQGTIKVREELGsey--snvSNKQIEEALWNYFYDVAKSVSYLKNTYKPA 86  Macrophomina phas...
EOD51249      14 EDLgYdDDEYADGge--eEMSEEDKEQLRQGTIKVREALGady--snvTNKQIEEALWNYYYDVGKSVSYLKTARKKK 87  Neofusicoccum par...
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