6AH0,2DK4


Conserved Protein Domain Family
PRP4

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pfam08799: PRP4 
Click on image for an interactive view with Cn3D
pre-mRNA processing factor 4 (PRP4) like
This small domain is found on PRP4 ribonuleoproteins. PRP4 is a U4/U6 small nuclear ribonucleoprotein that is involved in pre-mRNA processing.
Statistics
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PSSM-Id: 400930
View PSSM: pfam08799
Aligned: 155 rows
Threshold Bit Score: 32.2765
Threshold Setting Gi: 358058161
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6AH0_K       108 VKACLRALGEPITLFGEGPAERRERLRNI 136
XP_001728909  12 aIQRLRQKGEPIHLFGETSRERRMRLRSL 40  Malassezia globosa CBS 7966
XP_015647118 124 VVRRLRILREPVTLFGEDDADRLARLKFV 152 Japanese rice
EFJ06889      99 VIRRLRLLKQPITLFGEDDEMRLERLKVa 127 Selaginella moellendorffii
XP_009111169 113 VIRRLRILKQPVTLFGEDDQARLDRLKYV 141 field mustard
XP_015159083  93 VIRRLRFLKHPVTLFGEDEDARFDRLNvv 121 potato
XP_018683695  84 VVRRLRILKQPATLFGEDDAARFRRLQAv 112 wild Malaysian banana
EDQ52356     102 VIRRLRYLKQPVTLFGEDDDDRLARLKAL 130 Physcomitrella patens
EFJ42768      86 VIRRLRALGEPATLFAESDFDRLKRLRKA 114 Volvox carteri f. nagariensis
EDO07478      92 IINQLRRHKEPATIFAETREDRIERLYQA 120 Babesia bovis
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