Conserved Protein Domain Family
Rad33

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pfam08730: Rad33 
Rad33
Rad33 is involved in nucleotide excision repair (NER). NER is the main pathway for repairing DNA lesions induced by UV. Cells deleted for RAD33 display intermediate UV sensitivity that is epistatic with NER.
Statistics
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PSSM-Id: 400876
View PSSM: pfam08730
Aligned: 12 rows
Threshold Bit Score: 206.401
Threshold Setting Gi: 448097445
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6BTC5                      17 FLRLDPEIEDEILEAYSSITLE-------SQDFFLHQLPNYLRQLQIPTCFTNDITQCVDYYYE----YMHNEggDFKLN 85   ...
XP_004198676                16 FEKLNDDKVDEILEAYNVTLDG-------EDDFHLSKVPTLLEYLNIPGCFTEDINECIDYYYT----MMHSR--DLSAG 82   ...
ABN65137                    18 YERVPSEIEDEILEIYTKLTEK-------GEDLYLSDLPELFESLRIPNCFVEEINQCISYYYK----FMRSKp-QLKFD 85   ...
EMG49158                   649 FEQLDPEIEDEILEVYSELINDd------DQDLYLNQLAQIFEDLKIPSCFTQDIEQCIDYYYN----FIKDR--DVTLD 716  ...
WGS:AACQ:CAALFM_C306270CA   17 FEQVDEEIEDEIFETYSELLGDev----eNQDVTLSQLPQILSDLRIPKCFTKDIEKCIDYYYD----FIKDK--DVHLD 86   ...
XP_002547937                16 FEELLPEIEDEILEIYSDLVDDe------EQDLYLNQLPQIFQTLRIPNCFSKDIIHCVDYYYG----FIKDK--NVQID 83   ...
EDK44529                    16 YSLVDPELEDEILEVYTNYMDSqmdlkevEQDLALRDLPQMFSMLNIPSCFTKDIEAAIDYYYD----IMKSKk-SSMID 90   ...
CCE44665                    16 FDEIVPEIEDEIVEKYAQQLGDd------DTDLHLDRLPQMLDELDIPNCFTTDIKAAVDYYYQ----FMHDG--NYTIN 83   ...
XP_007376518                13 FEKINADTEDEILDEYSELLGD-------DDDLHLKELPELLQNLRIPAIFTDDIVESVEYYYN----FIRNR--DVSID 79   ...
EDK40809                    11 FPKVREDIEDEILEAYAEHTD--------GDDFHLKTLPNFFHELSIPSCYFTDISECIEYYYS----HIDGR----GID 74   ...
XP_006688746                13 FLSINPQYEEEVLEVYAILTEE-------VEDLQLKQLRTVFKRLQIPKCFTADILQSIDHFYEsngtLIKHR------- 78   ...
EEQ37122                    37 YAKLDQQHEDDVLDAYSWILETt-----gTQDVVLAHIPSLLDHLAIPHIYTRDITECIEWFYD----IAKVK-----TA 102  ...
Q6BTC5                      86 ESNYKQAITFQLILAYTIt-ASTNDINEvnIIDIVDIDKLIRNANKLVKFRNAYTHIYGSWKLFVDAATTlt-dSSELTV 163  ...
XP_004198676                83 SLNSKLEIVFSFLEAYTI--TSAEEIGKmqYIDIVDIDKLINNVDKLLKFRDNYEYIYDSWKLVTDAVADt--pLDTSQT 158  ...
ABN65137                    86 STNAKQYTTINLIHAYCVt-GTVKSLED--ILDIVDIDKLIRNVARLVKFRDNYKHIVDSFRLFVASASSk--tLTDSEV 160  ...
EMG49158                   717 HLNKKQSNTVSMIQAYTIt-SNMKSLND--IIDIIDIDKLLKNLNRLVKFRNHSRHIIDSWKLFVNSATDnsppSSSSSI 793  ...
WGS:AACQ:CAALFM_C306270CA   87 PLNTRQQNTLAMIHSYTVt-AGIKQLDE--IIDILDVEKLLYNLNRLIKFRNNYSHIRKSWQLFVSTAAD------SSAS 157  ...
XP_002547937                84 PMNKRQSNTINMIHAYTIssSNIKDIGS--IIDIIDIDKLLRNLNRLIKFRNNYKHILASWKLFVTSANNgkptMTTSSL 161  ...
EDK44529                    91 RTNRKQNITMYMIEAYTItpSSVKVVDD--VLDIVDIDKLINNLNRLLKFRNNYSHIRASWALFFADGAD----YYNANH 164  ...
CCE44665                    84 NSNVKQHNTLEMLSSFTIt-TSIQTPAD--ISDIIDIDKLIQHLNKLVKFRNHHQHIASSWKMLIQESGE-----SPANI 155  ...
XP_007376518                80 PSNIKQSMSFQLIKAYTIt-NAIRAPSD--IIDIIDIDKLLFNVNRLVKFRNNYKHIRESWRLFVSD---------SSNI 147  ...
EDK40809                    75 VGNTNEWITYQMLIAYTL---TISSNPDq-LLDVVDIDKLIRNTSTLIKFRNNHSHILASWKLFVEVGAP------GSNP 144  ...
XP_006688746                79 --TPKSDIVLHMVTTFTIs-SRLVNDSD--IIDIVDVDKLISYTSKLLYYRDNYTHIKNTWRLFVETVLGs--aPSVSEL 151  ...
EEQ37122                   103 RGGPRWIIAQDLLTQLTIs-SYVNGEFD--VSDVVDIDKLLKFCARLIKFRDCSETIESAWALFLDAGGS---------P 170  ...
Q6BTC5                     164 TNYQLTLPDLKKIKSFLNLDET 185  Debaryomyces hansenii
XP_004198676               159 LSYHLTLPDLKKLKKKLNLDSQ 180  Pichia farinosa CBS 7064
ABN65137                   161 INYKLTLPDLKQVKTELNLDQD 182  Scheffersomyces stipitis CBS 6054
EMG49158                   794 ENFTLTFPDLKKIKSNLNLDSD 815  Candida maltosa Xu316
WGS:AACQ:CAALFM_C306270CA  158 ETYKLTFPDLKKIKTSLNLDSD 179  Candida albicans SC5314
XP_002547937               162 ESYQLTFPDLKQIKTNLNLDAD 183  Candida tropicalis MYA-3404
EDK44529                   165 ENYKLDLPGLKAVKTKLGLDND 186  Lodderomyces elongisporus NRRL YB-4239
CCE44665                   156 ELYQLTLPGLKNVKSSLNLDND 177  Candida parapsilosis
XP_007376518               148 EHYKLALPDLKQVKSNLNLDND 169  Spathaspora passalidarum NRRL Y-27907
EDK40809                   145 ETFRLTLPHLQAIKEHMNLDSg 166  Meyerozyma guilliermondii ATCC 6260
XP_006688746               152 LEFKLNLVDLKKIKSVLGLDGs 173  Yamadazyma tenuis ATCC 10573
EEQ37122                   171 KTGRLSAKELRRVKSYLQLDDi 192  Clavispora lusitaniae ATCC 42720
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