2FPN


Conserved Protein Domain Family
DUF1779
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pfam08680: DUF1779 
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TATA-box binding
TATA-box_bdg is a family of bacterial proteins. YwmB from Bacillus subtilis contains a circularly permuted TATA-box binding protein-like fold. Jian-Xiang Liu, Qi Xie, Jun Lin. Protein Structural Data Mining and Evolutionary Bioinformatic Analysis on Domains of TATA-box Binding Protein-like Fold. Life Science Journal 2014; 11(2): 298-302 (not yet in PubMed 27-02-2014).
Links
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Statistics
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PSSM-Id: 400839
Aligned: 30 rows
Threshold Bit Score: 112.42
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2FPN_A          31 LTE--KEFYQKVQRLKQEyrqydwVIAREDK-XIKAIGTYTDKKNRTSFRLQLVTT------LKKHNPTSYLLYEqxsle 101 Bacillus subt...
WP_014966424    63 IEDlrQTTEDISKSIGLI------KINSEEIeETNMNQVTTYAQDDSERNITIVAYsf--fdEESQKGETTIFLDi---- 130 Gottschalkia ...
jgi:Ccel_0279   66 VSElsKVCEDVFKTLEIS------QYSKNTNsSDNLAKKEMHGTTADGVKVSAMASiv---gNKSGNRDKYITID----- 131
jgi:Cthe_2614   62 fEElsKIVDNLAKDMNVEnn---eLYSRRLIgNDMIDKIEVIGTIGRGRMVNICAQsa---rNKKDGEKSYISLSl---- 131
jgi:Clocl_0306  65 MEKllKLADQLEMDLSVVkn---nTYTKQYVkEHSFDKLEIKGICADGKRVDIAAQq-----CKDNSQKSNISVNv---- 132
CCP27067        60 FTQmqQYQDEIMKIFNAEk----eNFDFTEEnNETYRILNTEGKLDSDTFLQIIIQsvilpaEYEKDPQTYLTIS----- 130
Q18CL2          62 NKEfhNIFIEIINNLKLDk-----KGINWNQkGSGDKIQLCATIKGSDKEISIk-------gINKNNKESYIVVDi---- 125 Clostridioide...
WP_012811967    92 ETQlaALGAQVVQELGLA------NVKTQAAqLVNETYWRAVGVWPSGTRAEVVLTsfpgapSGAGDGQPETVMTvt--a 163 Alicyclobacil...
WP_013077104    66 TDQlkRMAARLNATLQLR------DTREWVYdQGDQRVFQLQGWWPGGTSGVLVITs----lKTDSQPDTTLVLRv---- 131 Kyrpidia tusciae
jgi:Mahau_1783  63 GTQirQLGNDVAKAIDIIk----sPYRCDVVdDEAQHWIKIYS-----DNVSVSVRm----sDDVDDTQSYITVNa---- 125

2FPN_A         102 tPDSWND-----TYEQFERETLGIfQEKVVIFTCLNGHLDDNXNIV-LQKKANQLLNEFQARSVEHVVEPNFVSISAFTD 175 Bacillus subt...
WP_014966424   131 -NETNKYeeldeMTSKLSHTLKKY-DTNVEITSCIVGTFEGKLESDyKMGKIEQIVNITKGKPVESLIDPSITSVSLYSE 208 Gottschalkia ...
jgi:Ccel_0279  132 -ATEAGDgkallLREKIEGVFTKY-RLKAEINSCITGTYEGDLSDNqLESICRKILNESSAKKIDSFRQQNEISVSAFSP 209
jgi:Cthe_2614  132 -TLGPEEfelerIHDNLINVLDKY-KIEPELNICITGYFEGRMDYKnLNKVSKKILKSADAKKVNGIAENNLISVSAFAP 209
jgi:Clocl_0306 133 -INRMGAldindTVNAIKERFKSL-KLKPKINTCIIGCFDGKLDYEeMNRISENILKCAKAKKIESLYDNNLISISAYSP 210
CCP27067       131 -ISSRNLekyndFVKKVSKTINSL-GGQSKITSCVTGTFNGKLDEAkQDKLVETIASYFEIINTEKIQDKYNFSIIGFSP 208
Q18CL2         126 -LDNKVYkhkevIYSNVENVLNKY-SSQVDVSACIVGEYTKRLQNNkYDDILQKILYNMSAKQIDEVKDVNFLSITAYSK 203 Clostridioide...
WP_012811967   164 sSSNLTEgqfssQYDQVERTVASV-NGTPQMSAYIAGFKPSEVSEAeADGMAIAALRAVGAAAVEGIRTPLETSLSGYSA 242 Alicyclobacil...
WP_013077104   132 eHTGPGTdglaaAYDRVKQTVASA-GQTPRIDSCLYGSLSDRMSETeRQNRIAQALASVRAKEVEALRTPLVTSVSAYSP 210 Kyrpidia tusciae
jgi:Mahau_1783 126 -CGDIQNaklddIVKSIEKGLKQY-SENIHMSLALKGYIKGEARQQtLDRLNSVAFKSLNAQYVEGIKSEKLHSTTAYSP 203

2FPN_A         176 EWEEYI-XtSKHKXNLQIALRSAGXGGKHTVTVGTP 210 Bacillus subtilis
WP_014966424   209 YIDRYIfS-GDKKMNLNVSMRYNEYENKTYMLIGTP 243 Gottschalkia acidurici
jgi:Ccel_0279  210 LISDKLrV-GGKNVNLGIAFRYNKLENRTYLWVATP 244
jgi:Cthe_2614  210 GIDNSIlV-NGKKVNMNLAIRYNSYEDRTYIWLATP 244
jgi:Clocl_0306 211 CIDNNIeV-KGKRININIALRYNAYEDKTYIWLATP 245
CCP27067       209 LLSEGIqI-LGKNYNIHIAIRYNSDEDITYIWIGTP 243
Q18CL2         204 VLNDYElEyLGEKINLNIGIKYNEDDGKTLIYIATP 239 Clostridioides difficile 630
WP_012811967   243 RAPVYVlAgDHRRVNVQVAVHDDSFRHGTDVYVGSP 278 Alicyclobacillus acidocaldarius
WP_013077104   211 QTKEYIlT-GGKKMNLQIAVHDDAYGNKTRVVVGTP 245 Kyrpidia tusciae
jgi:Mahau_1783 204 SIRHYVdI-KGRKANMQLAARYNSYDNRTDVWLGMP 238
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