6I52,2PI2


Conserved Protein Domain Family
Rep_fac-A_3

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pfam08661: Rep_fac-A_3 
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Replication factor A protein 3
Replication factor A is involved in eukaryotic DNA replication, recombination and repair.
Statistics
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PSSM-Id: 400821
View PSSM: pfam08661
Aligned: 19 rows
Threshold Bit Score: 106.972
Threshold Setting Gi: 75180877
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6I52_A         1 MASE--TPRVDPTEISNVNAPV--------FRIIAQIKSQp-TESQLILQSPTISSkngsevemitlNNIRVSMNKTFEI 69  Saccharomyces c...
XP_011390654   1 MEKP--TPLINSSMLGQYVGQT--------VRIVGKVHKV--TGNTLLMQTSDLGN-----------VEIAMTPDSDVSS 57  Ustilago maydis...
Q9VYW3         1 MDAFdpRSIINGGMLKQFSGQT--------VSIMVRVESV--AGSTLLASSTDNHK-----------LKINLPGELGAAE 59  fruit fly
Q757Z3         1 MSHQ--TPRLDPAQIASTNHSV--------FRLIAKVVAQp-KQEEITIQSPTTNRemv------tlGSVRVSQLTKFKV 63  Eremothecium go...
Q6FX48         1 MASE--TPRIDPSEITSNTSPV--------FRIIAQVKSQp-SENTLILASPTTGGemi------tlDSVRVSMNKTFDV 63  [Candida] glabrata
Q6CXQ0        29 MSNQ--TPRIDPSQISNTQHSV--------FRIIAKVLDQp-QPKELILQSPTTNGemi------tlSQVKLSQGSNIEV 91  Kluyveromyces l...
Q5APD5         1 MEAS--NIRIDGTLLQANKNKL--------VRVMGKCESFdhASNQAIIVCNGTIK-----------LDLSQVTDSPLEI 59  Candida albicans
Q6BWE1         1 MDAA--SIRIDSTFLEQHQGRL--------VRIMGKCQSYdpSSNNSILISN--GP-----------VTLISNPGEELVV 57  Debaryomyces ha...
Q5KM45         1 MSRLgpEPRINSKHLSQHRGEI--------VRLIAKVATL--SGDTATLETSDGGT-----------VRIHLPRDMHIA- 58  Cryptococcus ne...
Q5AY03         1 MSLQ--TPRVLPSHLHAFNPSTsgprsappVRLLGTVTAL--HGDTATITCGTHGD-----------VTLILKPDSHLQM 65  Aspergillus nid...
6I52_A        70 DSWYEFVCRNNDd-gELGFlILDAVLCKfkeNE-----DLSLNGVVALQRLCKKYPEIY 122 Saccharomyces cerevisiae S288C
XP_011390654  58 STFVEVTGKVSD---AGSSfQANQIREF---TTvdcghDVDLTLVENVVQISAAFPNLF 110 Ustilago maydis 521
Q9VYW3        60 GAWVEVIGVPHG---ADTL-RAKEVIEF---GGen--iDFDKDGYNGLSHLINNVKAFY 109 fruit fly
Q757Z3        64 EQWYEFVCRASDs-gDAGVfVLDSVELPlpsGE-----ELSVDGVVALQQLCSKFPEMY 116 Eremothecium gossypii
Q6FX48        64 DSWYEFVCRSSDn-gDVGFlVLDAVKCVlneNE-----EISVNGIIALQQLTKKFPEIY 116 [Candida] glabrata
Q6CXQ0        92 GSWYEFVCRNVDt-gDIGLmVLDSVKCElkeGE-----EISVSGIVALQQLSGKFPDLY 144 Kluyveromyces lactis
Q5APD5        60 HKNYEIIGKVSGd--ELKI-FVYSVIEL---SD-----NLDINAASKLAQYAQKVSELY 107 Candida albicans
Q6BWE1        58 NKNYEIIGKVGTs--DLSV-RVLSAIEL---SD-----NLNFDTAQKLVSYVHKVPELF 105 Debaryomyces hansenii
Q5KM45        59 DQYVEIIGTVKE---DLTI-RAHTHIGL---GN-----NLDLKAVNNVIEFSHSPIGQG 105 Cryptococcus neoformans
Q5AY03        66 GKLVEVVGKVAEidgGLGI-RVLATTDW---GNp---aDCDYKIYEKVVDVTHRLKPIF 117 Aspergillus nidulans
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