Conserved Protein Domain Family
Nexin_C

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pfam08628: Nexin_C 
Sorting nexin C terminal
This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.
Statistics
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PSSM-Id: 400794
View PSSM: pfam08628
Aligned: 224 rows
Threshold Bit Score: 51.433
Threshold Setting Gi: 341899485
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_010654660   958 W-IRRKAFwvaKQVLQLGMG---DAFDDWLIEKIQL-LRKGSVIASGIKRVEKILW-----PDGifltkhpkrrrpsvpi 1027 wine grape
PNI88007        45 W-LHH-LLmgtRILFKNTLE---MYTDYYLQCKLEQ-LFQEHRLVSLITLLRDAIFcenteP------------------ 100  chimpanzee
XP_023808755   786 W-LHH-LLaagRILLKNTLE---AYMDQYMQSKLDQ-VLQEHRMVSLITQLRDAVF-----C------------------ 836  Japanese medaka
CAF89931       842 W-LHH-VLaagRILLKNTLE---AYMQQHMRSKLEQ-VLQEHRLVSLITQLRDAVFceggaQ------------------ 897  spotted gree...
XP_027896718   556 W-LHH-VLaagRILFKNSLE---AYMDRYLRSKLEA-VLQEHRLVSLITQLRDAVF-----C------------------ 606  Monterrey pl...
11_pfamImport    1 W-LHH-GLaavRILLKNTFE---AYMDQFMQSKLEQ-ILQENHMVSLITQLRDSVFcesseQ------------------ 56  
ESO00147       196 W-LMQ-LFlslRMLLRNTID---TYLDWYLNRKLQQ-ALTEHYVVKIIHLLRDAIFydtdpP------------------ 251  Helobdella r...
O74444         578 WfFRKSVLtimKTTVLHGPGrfsAQVERMLKNQIYDkLSNTQLVGDLLTSLILNVW-----PDEkka------------- 639  Schizosaccha...
XP_006008923   749 W-LHH-LLmggRMLFKNTLE---AYTDYILQCKLDK-LLQEHRVVSLITLLRDAVFrenteP------------------ 804  coelacanth
KAE8289969     120 W-LHH-LLmtgRILFKNTLE---AYTDYYLQYKLNQ-VVQEHRLVSLITLLRDTVFcesslP------------------ 175  large yellow...
XP_010654660  1028 spsqmsphgqqPAQMSspkMEDLQKlqekehnlvldelqqQe---------------aDRRAKLVYELMIdNPPSAIVGL 1092 wine grape
PNI88007       101 -------------------RSLQDK---------------Q-----------------KGAKQTFEEMMN-YIPDLLVKC 128  chimpanzee
XP_023808755   837 --------------ESgekRTAEDR---------------Q-----------------ARAKQTFQEMIR-YLPDFVGKC 869  Japanese medaka
CAF89931       898 -------------------RSLQER---------------H-----------------ARARQTFQEMLR-YLPEWLVRG 925  spotted gree...
XP_027896718   607 --------------ENhqeRSPEEK---------------L-----------------QRAKQTFDQMMS-YLPDAVVKL 639  Monterrey pl...
11_pfamImport   57 -------------------RAPEDK---------------Q-----------------VRAKQTFDEMMN-YLPDFVEKC 84  
ESO00147       252 -------------------RSEEDK---------------K-----------------KRQKEAFKDLLN-YIPNVFVRV 279  Helobdella r...
O74444         640 ---------meSHSTRahrRSTESKisfdseadslfeeasKsvpedpvsvfcdeesdeSLRLRAEKTLVEnALSENFTLM 710  Schizosaccha...
XP_006008923   805 -------------------RSLRDK---------------Q-----------------KRAKQTFEEMMN-YIPDFLGKC 832  coelacanth
KAE8289969     176 -------------------RSPQDK---------------Q-----------------KRAKKTFEEMMS-YIPDFLGKC 203  large yellow...
XP_010654660  1093 VGRKEYEQCAKDLYFFLQSSV 1113 wine grape
PNI88007       129 IGEETKYESIRLLFDGLQQPV 149  chimpanzee
XP_023808755   870 IGEEAKHDGVRLLFDALQQPL 890  Japanese medaka
CAF89931       926 LGEEGNSQGIRLLFEGLQQPL 946  spotted green pufferfish
XP_027896718   640 IGEERQRDGIELLFQALQQPL 660  Monterrey platyfish
11_pfamImport   85 VGQEAKYEGIRLLFESFQQPV 105 
ESO00147       280 VGSEKHKKGTKLLFDVLQRPR 300  Helobdella robusta
O74444         711 LGQSTSEESLKIIFELLQEPQ 731  Schizosaccharomyces pombe 972h-
XP_006008923   833 IGEDAKYEGIRLLFDGLQQPV 853  coelacanth
KAE8289969     204 IGDEAKYEGVRLLFDGLQQPI 224  large yellow croaker
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