Conserved Protein Domain Family
Tombus_P33

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pfam08500: Tombus_P33 
Tombusvirus p33
Tombusviruses, which replicate in a wide range of plant hosts, replicate with the help of viral replicase protein including the overlapping p33 and p92 proteins which contain the domain described here.
Statistics
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PSSM-Id: 149522
View PSSM: pfam08500
Aligned: 10 rows
Threshold Bit Score: 152.656
Threshold Setting Gi: 148469640
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8JMT5   135 RLAAGFALAPVCllavyatLP---REKLSVFRLRTEARTHMEDEREATECLVVEPaRELKGKDgedllTGSRMTKVIAST 211 Pear latent virus
Q80R15   107 RLAVGMLLTPVCvaaayatLP---REKLSTYRLRSEAREHMEDEKEATECLVVEEaRQLKGKDgediiTGSRLTRVVAKT 183 Cucumber Bulgarian ...
Q9E351   107 RMATAVVTLPLTavatyatLP---RESLSAFKMRKEAMADMGDESDATECLEVWKaKSIKGPDgeevvTGSRITRVVAKV 183 Maize necrotic stre...
Q83102    62 KLQLGF-------------SPe-aTALMHRFV------DLFSRDDE-PVITETSC-NVDFLPG-----PESRKENLVAPK 114 Leek white stripe v...
P27209    52 QVKITV-------------HPa-aRETFESMVRKFQAESMFSEEAT-PCIVSVGDkDADLTPD-----PQREDIKIVKSS 111 Tobacco necrosis vi...
Q8B5S0    53 KIKVEV-------------HPa-tRAVFKDMVTRFQRESMFSPDDEVPEGIPIHE-DVDLVSD-----PTHKDIKRVRAS 112 Beet black scorch v...
Q283N2    77 SITLYSIILLCIgskyggrLP---RYIVAHYERIKEAWEKGVDDDDCTATP-----------------PVDCMERVPHKL 136 Cucumber leaf spot ...
Q84831    80 TLTMAAIIAACVgakyggrVP---RYIRAHVDRIRKSWEKGVDDDDCCAPL-----------------PETSLERVPVKL 139 Pothos latent virus
Q70P85   137 WLGVIVGYIICV-------LPsnvRYYIELGQKIQDAWDSVEADDTIEA-------------------PCNGDILEVRKG 190 Johnsongrass chloro...
ABQ65749 139 WVCLLVVFVFCT-------LPadaRYYIKLAKKIQDAWDAVEEDDSITP-------------------AADGGPLEVRSG 192 Maize white line mo...
Q8JMT5   212 grpRRRPYAAKVAQVARAKVGYLKNSPENRLIYQRVIIEIMDKDCVRYIDRDVILPLAIGC-CFV------------YPD 278 Pear latent virus
Q80R15   184 grpRRRPYAAKIAQVARAKVGYLKNTPENRLIYQRVLIEIMDKDCVRYCDRDGVLPLAIGC-CFV------------YPE 250 Cucumber Bulgarian ...
Q9E351   184 k-pRRNRYAAKIAQVARSKVGYLSNTPENRLIYQRVLIEIMDKDCVRYCDRDALLPVAIGL-CFV------------YQE 249 Maize necrotic stre...
Q83102   115 ---RRNHYIVKVAMAAKSQVGLLGNSRANELVYARLCREEMVKHGVRPSHIARMVPLAVDChCFIpmdedimaaemmRTD 191 Leek white stripe v...
P27209   112 ---RRVSYAVRVAHVAKAQVGLLANSRANELVYSRLCREEMVKHGVRPSHIAHMVPLAVAA-CFIpldsdflaasirQGE 187 Tobacco necrosis vi...
Q8B5S0   113 ---RRVSYAVRVAHVAKSKVGLLANTKANELVYSRLCRDEMVTHGVRPSHIAHAVPLAVAA-CFIpldsdflaasirNCD 188 Beet black scorch v...
Q283N2   137 ----RPRLACKIAVRAVAKVGLLKRSEANALVYQRVCLDIMESMKMRWHDRLMVLPQAVLA-LLE------------RPE 199 Cucumber leaf spot ...
Q84831   140 ----RPRLACKIAVRAIAKVGLLKRSEANSMVYQRVCLDVMESMKMRWHDRLVILPQAVLA-CLE------------RPE 202 Pothos latent virus
Q70P85   191 ----RNKFACKLAARAIGRVGLLKATPANALVYQKVILDEMKILNVRFADRVRILPLAVMA-SLD------------RPD 253 Johnsongrass chloro...
ABQ65749 193 ----RNRFACRLAARAISRVGLLKPTKANALVYQKVILDEMKVLNVRFGDRVRVLPLAVVA-CLE------------RPD 255 Maize white line mo...
Q8JMT5   279 GVEESAALWGSS 290 Pear latent virus
Q80R15   251 GTEEASQLWGSQ 262 Cucumber Bulgarian virus
Q9E351   250 GVREASQLWGST 261 Maize necrotic streak virus
Q83102   192 VMRSRRKDMGDS 203 Leek white stripe virus
P27209   188 GMRERRALLGPS 199 Tobacco necrosis virus D
Q8B5S0   189 EMEERRAVLGPS 200 Beet black scorch virus
Q283N2   200 EVEEVMKAIEAS 211 Cucumber leaf spot virus
Q84831   203 EVEEVMKAIEAS 214 Pothos latent virus
Q70P85   254 AVARVEDCVAAL 265 Johnsongrass chlorotic stripe mosaic virus
ABQ65749 256 AVDRVEGVIDAL 267 Maize white line mosaic virus
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