Conserved Protein Domain Family
FBD

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pfam08387: FBD 
FBD
This region is found in F-box (pfam00646) and other domain containing plant proteins; it is repeated in two family members. Its precise function is unknown, but it is thought to be associated with nuclear processes. In fact, several family members are annotated as being similar to transcription factors.
Statistics
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PSSM-Id: 400612
View PSSM: pfam08387
Aligned: 253 rows
Threshold Bit Score: 36.5532
Threshold Setting Gi: 548857949
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9FZ52        366 DlSYVPQCFLSSLEFVHLktpyvvnmqkegRPL----TG-TSSK--RKLAKYFLENGAALKKLTV 423 thale cress
ERN05586      412 L-RKPTYCMANHLKTVTV------------TNL----EG-LVGE--IRFVTFLLRHTRKLENITL 456 Amborella trichopoda
27_pfamImport   1 -vDSPVQCLTHHLKKVVV-------------------AGhAMKKqvIQYLEYLFEHFVVLEEMKI 45 
EFH59149      369 rsEESPDCVRTMLKILQI------------RNF----KP-NRLQ--ISVLRYVLDNAEILGSVIL 414 Arabidopsis lyrata subsp. lyrata
CBI23316      105 seEKSFKCLLQNLKIIKI------------VGFdpgyCD-IQFA--IAFIEFLLKNAQVLEKMVI 154 wine grape
XP_006366128  400 dpEESIVCLDSHLKSIQL------------IGF----KD-EENE--IELIRFFLKNARVLEKFRI 445 potato
PNT64187      407 K-AGPILSVLFRIKVMTF------------SEF----RG-EQYE--LSFLQYFFESARMLKYATI 451 stiff brome
XP_002442121  403 E-AGPIVSVLMRIKVMTV------------REF----RG-EQHE--LAFLQYFYENARVLKYASv 447 sorghum
XP_006366040  394 NlRSVPPCFLSSLKTVKY------------SNF----HG-NDTE--ISFLRNLLEIAIVLEKLNI 439 potato
XP_015161532  317 dpSESVVCLESHLKLIQL------------AGF----KN-EEKE--IELLRFFLKNAQVLEKLIV 362 potato
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