Conserved Protein Domain Family
PDR_assoc

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pfam08370: PDR_assoc 
Plant PDR ABC transporter associated
This domain is found on the C-terminus of ABC-2 type transporter domains (pfam01061). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [pfam06422]. The PDR family is characterized by a configuration in which the ABC domain is nearer the N-terminus of the protein than the transmembrane domain.
Statistics
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PSSM-Id: 400601
View PSSM: pfam08370
Aligned: 139 rows
Threshold Bit Score: 52.505
Threshold Setting Gi: 1079400963
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAJ97406      725 WAKPNNgttsIDALTVGEAILKAKGYFTRDWGFWVSIGALVGFTILFNILYLLALTYLSFGSSSN 789  domesticated barley
XP_019069418  748 WSTHNNds-sFSEETVGKVLLKSRSMYTDDYMFWICVIALFAFSFLFNFCFILALTYLNPLADSK 811  tomato
XP_006349092  744 WSAPTN----GSQPTVGKTLLHDRGLFTTEAWYWICIAALFGFSLLFNVLFIAALTFLNPLGDIK 804  potato
XP_010651721  735 WNNPVP----NSTDSVGVTLLKERGLFSDEHWYWICVGALFAFSLLFNVLFIAALTFFNPPGDTK 795  wine grape
EEF33323      740 WSNATGn---PIEPTVGISLLRERGLFTTEKAFWICVVALFAFSLLFNVLFVLALTYLNPFGDNK 801  castor bean
EEF33324      740 WSTPTGn---PNASTVGLSLLEERGLFTTERWFWICVGALFGFSVLFNILVVVALTFLNEPNSKK 801  castor bean
XP_002879608  742 WGSPNSdt-rINAKTVGEVLLKSRGFFTEPYWFWICIGALLGFTVLFNFFYIIALMYLNPLGNSK 805  Arabidopsis lyrata subsp. ly...
XP_009393266  642 WNMKTEng-eSTGDTVGKTILRSRGMLTEWHWFWYSVMILLLFALVFNILSIFALEYLRAPQKSR 705  wild Malaysian banana
XP_015696054  634 WGKEFHy---ENANTIGEAILKIRGLFIEWQWYWICLSVLFGFSVVFNILTIFALEFLNPPYKQK 695  malo sina
KAE8781511    650 WAIEFHy---ANAKTVGEAILKIRGLLMEWHWYWICVGILFGFSLVFNILTIFALEFMKSPHKHQ 711  Hordeum vulgare
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