6CAM


Conserved Protein Domain Family
GbpC

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pfam08363: GbpC 
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Glucan-binding protein C
This domain is found in the Streptococcus Glucan-binding protein C (GbpC) and also in surface protein antigen (Spa)-family proteins which show sequence similarity to GbpC.
Statistics
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PSSM-Id: 400594
View PSSM: pfam08363
Aligned: 5 rows
Threshold Bit Score: 263.292
Threshold Setting Gi: 81722472
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CAM_A          43 EQYKKEvaqglaSGRVEK--AQGLVFIN-EPEAKLSIEGVN---------QYLTKEARQKHATEDILQqynTDNYTAsdf 110  Streptococcu...
bgi:05SSU0965  389 EISKGE------EGYISEalAQALNLNNgEPQAQHGANTRNp-------dQIISTGDALLGGYSRILDstgFFVYDS--- 452  Streptococcu...
P23504         492 EKHKNE------DGNLTEpsAQNLVYDL-EPNANLSLTTDGkflkasavdDAFSKSTSKAKYDQKILQ---LDDLDItnl 561  Streptococcu...
Q839L6         256 NKHKND------KGYVNEaiSKDLVFDS----------------------SIVTKDT-------KIDKitgGKFIKAsdf 300  Enterococcus...
P17953         256 NKHKNE------NGYVAKpvNKTLIFD-----------------------REATKNS-------KVVSvkaAEYIDAkkl 299  Enterococcus...
6CAM_A         111 tqanpy-------------------------------dpkedtwfkMKVGDQISVTYDNIVNSKYNDKKISKVKINYTLN 159  Streptococcu...
bgi:05SSU0965  453 ----------------------------------------------FKTGETLSFNYQNLQNARFDRKKISRVTYDITNL 486  Streptococcu...
P23504         562 eqsndvassmelygnfgd--------kagwsttvsnnsqvkwgsvlLERGQSATATYTNLQNSYYNGKKISKIVYKYTVD 633  Streptococcu...
Q839L6         301 nkvnqgqskdiftklskdmngkatgnfqsskvaavefgpkggyavlLEKNKPVNVTYTGL-NASYLDRKITKAEFIYELQ 379  Enterococcus...
P17953         300 tdkhkdkkllismlsvdssg---lttkdskkahfyynngaggtlvvLHKNQPVTITYGNL-NASYLGKKIASAEFQYTVK 375  Enterococcus...
6CAM_A         160 SST--NNeGSALVNLFHDPTKTIFIGAQTSNAGRNDK-ISVTMQIIFYDENGNEIDLSGnnAIM-SLSSLNHWTtk--yg 233  Streptococcu...
bgi:05SSU0965  487 VSP--AGtNAVKLVVPNDPTEGFIAYRNDGNGDWRTDrMEFRVVAKYYLEDGSQVTFSKekPGVfTHSSLNHND------ 558  Streptococcu...
P23504         634 PKSkfQG-QKVWLGIFTDPTLGVFASAYTGQVEKNTS-IFIKNEFTFYDEDGKPINFDN--ALL-SVASLNREN------ 702  Streptococcu...
Q839L6         380 SAP--SQsGTLNAVFSNDPIITAFVGTKNANGKD----VKVRLTIKLYDANGKEVLPDKdhAFAyALSSLNSSLgtnysv 453  Enterococcus...
P17953         376 ATP--DSkGRLNAFLHDDPVATIVYGINIDPRTKKAG-AEIEMLVRFFGEDGKEILPTKenPFVfSGASLNSRGe----n 448  Enterococcus...
6CAM_A         234 DHVEKVNLG--DNEFVKIPGSSVDlHGN-EIYSAKDNqy--kaNGATFNGdg-----aDGWDavnadgTPRAATAYYGAG 303  Streptococcu...
bgi:05SSU0965  559 IGLEYVKDS--SGKFVPINGSTVQvTNEgLARSLGSN------RASDLNLp-------EEWD------TTSSRYAYKGAI 617  Streptococcu...
P23504         703 NSIEMAKDY--TGKFVKISGSSIG-EKNgMIYATDTLnfrqgqGGARWTMytrasepgSGWD------SSDAPNSWYGAG 773  Streptococcu...
Q839L6         454 EHAEFVSDFgsKNEFKYINGSYVKkQADgKFYSTEDLdygtgpSGLKN----------SDWD------AVGHKNAYYGSG 517  Enterococcus...
P17953         449 ITYEFVK-VgnTDTVHEINGSKVArHGN-KVYSKTDIdv--gtNGISI----------SDWE------AVQGK-EYIGAT 507  Enterococcus...
6CAM_A         304 AM-TYKGEPFTFTVGGNDq--------------nLPT----TIWFATN 332  Streptococcus mutans
bgi:05SSU0965  618 VStVTSGNTYTVTFGQGD----------------MPQnvglSYWFALN 649  Streptococcus suis 05ZYH33
P23504         774 AI-RMSGPNNSVTLGAISstlvvpadptmaietgKKP----NIWYSLN 816  Streptococcus mutans UA159
Q839L6         518 VGlAREGGRISFSFGMTTkgk-----------vnLSG----AQWFAFs 550  Enterococcus faecalis
P17953         508 V--ISTPNRIKFTFGNEIv--------------nNPGydgnSMWFAFN 539  Enterococcus faecalis V583
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