5DEZ


Conserved Protein Domain Family
ChitinaseA_N

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pfam08329: ChitinaseA_N 
Chitinase A, N-terminal domain
This domain is found in a number of bacterial chitinases and similar viral proteins. It is organized into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin. It is separated by a hinge region from the catalytic domain (pfam00704); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution.
Statistics
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PSSM-Id: 400568
View PSSM: pfam08329
Aligned: 8 rows
Threshold Bit Score: 197.684
Threshold Setting Gi: 75353764
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5DEZ_A           17 AIPGTPVID-WADRNYAL--VEINYEAT-AYENLIKP-KEQVDVQVSWNVWNGDIGDIAYVLFDEQQVW----KGDAE-- 85 
Q5E4F3           24 AAPGQAIIS-WMETDFSI--IEIDQAAT-SYKSLVTV-KDFAEVPVTWDRWSGESAEKWRVLLNGVVVHeesvSPAASq- 97  Aliivibrio f...
Q9KND8           21 AAPSAPSVDvYGSNNLQFskIELAMETTaGYNQMVKY-HEEAPITLKFNQWSGVTGNTYKIYFDGVEVA----TGPISgs 95  Vibrio cholerae
wugsc:CKO_02217  23 AAPGTPSIT-SGNDKFAI--VEVDQAAQ-DYNNLVKVhNDGVDVKVEWNVWSGDAPTSAKVLLDGKTVW----SGAGSa- 93  Citrobacter ...
Q12MA8           28 AAPGKPSLA-WGETQFAI--IDVNQSAT-AYNQLVTV-KDAAAVSVSWSLWSGNVGERAQVLLNGNQVW----EGASSa- 97  Shewanella d...
O91465           19 SKPGTPQIR-WATHKYSL--VEVNEQAQ-SYNSLVKTvHESVPVSLEWDVWSGARGDSVHLVWDGQVVK----EGSSDel 90  Cydia pomone...
Q8B9D6           17 AIPGTPVID-WADRNYAL--VEINYEAT-AYENLIKP-KKHVDVQVSWNVWNGDIGDIAYVLFDEQQVW----KGDAE-- 85  Rachiplusia ...
Q87K43           21 AAPTAPSVDmYGSNNLQFskIELAMETTsGYYDMVKY-HDQAKITVKFNQWSGTPGDTYNIYFDGVKVA----TGAITgg 95  Vibrio parah...
5DEZ_A           86 SKRA-TIKVLVSGQFNMRVKLCNEDG----CSVSDPVLVKVADTDGGHLAPLEYTWLENNKPGRR 145
Q5E4F3           98 KAST-TLQVRQGGQYEMTVQLCNGSGateeCSTSAAKSIVVADTDGSHLDPLPMNVDPANGNYTT 161 Aliivibrio fischeri ES114
Q9KND8           96 QTTA-QFTYPKGGVYQLVIEACDATG----CTKSAPSEITIADTDGSHLKPLKMNVDPNNKSYTi 155 Vibrio cholerae
wugsc:CKO_02217  94 AGSA-TFKVKKGGRYQEQVELCNTSG----CTKSASKLIIVADTDGSHLLPLNTTMKENNKTFAQ 153 Citrobacter koseri ATCC BAA...
Q12MA8           98 SGTA-NFNVNEGGRYQMQVQLCNSEG----CTASDPKTIIVADTDGSHLLPLNAPLLENNRPYTN 157 Shewanella denitrificans OS217
O91465           91 REQKiVYNVRKGGRSSVAVRLCDGEG----CSDSVPVEVVVADTDGSHLGRLEYEWRENNVPYQR 151 Cydia pomonella granulovirus
Q8B9D6           86 SKRA-TIKVLVSGQFNMRVKLCNEDG----CSVSNPVLVKIADTDGGHLTPLEYTWLENNKPGRR 145 Rachiplusia ou MNPV
Q87K43           96 QTTA-TFDYGQGGLYQMEIEACDATG----CSKSDPAEITIADTDGSHLKPLTMNVDPNNKTYNT 155 Vibrio parahaemolyticus
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