Conserved Protein Domain Family
cwf18

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pfam08315: cwf18 
cwf18 pre-mRNA splicing factor
The cwf18 family is involved in mRNA splicing. It has been isolated as a subcomplex of the splicosome in Schizosaccharomyces pombe.
Statistics
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PSSM-Id: 400557
View PSSM: pfam08315
Aligned: 133 rows
Threshold Bit Score: 70.7163
Threshold Setting Gi: 217409498
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ERT01815              6 ALSAAADDRKARLAKLRSIKRKQPgDEIVPPESDRaspavv--------tqpkshGDETGEEGNTgeireagema----v 73  Sporothr...
WGS:AATM:SJAG_01810   3 tFNEASESRKQRLAELRRINQLQ--REQQNHEGN---------------------DNENETNSSV--------------- 44  Schizosa...
Q9UU80                3 SLDEVAESRKQRLAELRKIKQLE--NKTRDS---------------------------QEVQKNV--------------- 38  Schizosa...
XP_002132159          9 NLEEAARKRKERLKAMREQRMTG--GEPPSKKS------------------------GKEELPKPe-------------- 48  vase tun...
KJE89293             11 SLQDEAYKRRARLRAMREGAAASAvRRTNDDNDNNdndngdndddgkqtrhssqaTGGDRKRWRGednideadessamdd 90  Capsaspo...
XP_001746487          1 -MEDAAAERRARLKAMRANLMDSApEAEDKDTSSAvse--------------aepQESESSSEPQ--------------- 50  Monosiga...
EFO23336             28 SLEEEANERKRRLKEMRERMTQQ--QEDDGTE--------------------------LSNKSVK--------------- 64  eye worm
PDM82853             22 aVEEAIAARKRRLMEMKSRMNGVemkeedydkee--------------------------------------------tt 57  Pristion...
Q95XJ1               22 SLEAAAKARKRRLLAMKSKIHGIE-MQEEDYDEGE--------------------TSTKKSREVG--------------- 65  Caenorha...
EDV27666              8 SLELAALERKGRLKALAKEKGDSH-GNSKDRGEKRq-------------------LENTSSNMPR--------------- 52  Trichopl...
ERT01815             74 erdvsrlhLSGRNYDPETR-NARLGFEVEPNLAagdDTVEAQAAKLEADVRREQQEEeggdgegadgdarphdgGGKPI- 151 Sporothr...
WGS:AATM:SJAG_01810  45 --------LKFRNYDPVTQ-APKMGFVEPPTIGe--ETVEKVAANIEEETQKVLEEQqa--------------iPEEEL- 98  Schizosa...
Q9UU80               39 --------IEHRNYDPEVQ-APKMGFVEPPNMI---ESVEALSKEIEEKTKRKIEEQss--------------vPVEEL- 91  Schizosa...
XP_002132159         49 --------LKLRNYNPVGD-DLKEAVLANAEP----EKVEDQITNQLESQAAEPTV-------------------QEEV- 95  vase tun...
KJE89293             91 gsndadttLRFRNYTPNDA-KLANAQIEHPDL----PEPEKDVAEIAKADAR-----------------------IHDI- 141 Capsaspo...
XP_001746487         51 --------LKFRNYRPQTEi--EGEQIELAND----DNVENAVVQVLEEKAN------------------------DDVl 92  Monosiga...
EFO23336             65 --------LTFRSYEPQSDlGDKRDGVDL-------FAVEKEIADQLADTQDTRAV--------------------EQI- 108 eye worm
PDM82853             58 tkkskgqeKTFRSYQPVDA---SVGDVDPSVKTn-lRAVEEEIEEQLRLSKHKYYYYyrla---------ndtsHVDKI- 123 Pristion...
Q95XJ1               66 --------REFRNHKPDDAvGTQNVDMDL-------DIVQREITEHLKDVLHEKAI--------------------DSV- 109 Caenorha...
EDV27666             53 --------VKFRNYLPQDD-SLKDQKMEKPSA----PTAQEDVEEILSSTNA----Nt----------------KYEGV- 98  Trichopl...
ERT01815            152 ----------DLFKLQPKKPNWDLKRELNKRLEPLNARTDNAIGRLVRERL 192 Sporothrix schenckii ATCC 58251
WGS:AATM:SJAG_01810  99 ----------DLTSLRPKKATWDLERDLKERMTALETATQNAKAYYIRQ-T 138 Schizosaccharomyces japonicus yFS275
Q9UU80               92 ----------DLVTLRPKKPTWDLERDLKERMRSLETQNQNAIAFYIQQ-L 131 Schizosaccharomyces pombe 972h-
XP_002132159         96 ----------DILKLAPRKPDWDLKRDIQSKLDRLERKTQRAIAEIIRERL 136 vase tunicate
KJE89293            142 ----------DLVNLAPRKQNWDLKRDVTKKLEKLERRTNRAIAELIRDRL 182 Capsaspora owczarzaki ATCC 30864
XP_001746487         93 qqvtkgqaieDVLSLAPRKVDWDLKRDLEPKMAKLEKRTKRAIAELIRERL 143 Monosiga brevicollis MX1
EFO23336            109 ----------DITTLAPRKIDWDLKRDIAERLEKLERRTERAMAQLIRERL 149 eye worm
PDM82853            124 ----------DLQALAPKKVDWDLKRDLASKLEKLERRTQAGIAHLIRERL 164 Pristionchus pacificus
Q95XJ1              110 ----------DLAMLAPKKIDWDLKRDIESKLQKLERRTQKAVATIIRQRL 150 Caenorhabditis elegans
EDV27666             99 ----------DLVNLAPRKPDWDLKRTIEDKMQKLERKTQRSIVDIIRERL 139 Trichoplax adhaerens
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