Conserved Protein Domain Family
LVIVD
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pfam08309: LVIVD 
LVIVD repeat
This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise from 1-7 of 4-beta-strands which may associate to form a beta-propeller. The repeat copy number varies from 3-29. This repeat is sometimes found with the PKD domain pfam00801.
Links
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Statistics
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PSSM-Id: 285504
Aligned: 12 rows
Threshold Bit Score: 49.6421
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q8TIV7  508 AGHACDVAVSGNYAYVADSKNGLVVIDI---SNPSSPVMIGRYDT 549  Methanosarcina acetivorans
Q9X043  263 GGKAQSLWLYEGFLYIADFNGYLTVVDV---SDPSHMNEVFNVLT 304  Thermotoga maritima
Q8TQN0   42 GRDVSNVAVSGDYAYIG-QGNELVILDIsdaSNLSNLSEMGRVTT 85   Methanosarcina acetivorans
Q6MK51  227 GGDAMDIKVKGNYAYVAVQWNSLDIIDI---SNKAAPALSLSYMD 268  Bdellovibrio bacteriovorus
Q8TIV7  248 AGIACDVSVLGKYAYVADNDKGLAIIDI---SNPSSPTLKGSCDT 289  Methanosarcina acetivorans
Q8TQN0  170 SGDAWDVAVSGKYAYVAFG-AGLVIVDI---SAPTSPTLVGSYDT 210  Methanosarcina acetivorans
Q8TQN0  255 DGNTRGVAVSGNYAYVVDGDKGLVIVDI---SNPTSPTLASSYDT 296  Methanosarcina acetivorans
Q8TIV7  164 AGSTGDIAVSGNYTFVADWDNGLMIVDI---SNPSSPVFKGSYDT 205  Methanosarcina acetivorans
Q8TIV7  373 PGSAQDVVVSGDYAYIADR-NDLVIVDI---SNPSSPILKETFNT 413  Methanosarcina acetivorans
Q8TIV7  290 PGYARDISASGNYVCIADK-NDFVIVDI---SNPSYPGLKEIYNT 330  Methanosarcina acetivorans
Q8TIV7  331 IGMSKSISISGNYAYVADWDNGLLIVDI---SNPSSPILKGSCNT 372  Methanosarcina acetivorans
Q8TIV7  550 AGYADRVSISGNYAYVA-VDNGLIIVDI---SNPSSPILKGIYAV 590  Methanosarcina acetivorans
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